RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MS4A5Q9H3V2 200 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 TJP1Q07157 1748 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 ORM1P02763 201 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 LSM6P62312 80 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 COL19A1Q14993 1142 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF66Q6ZN08 573 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 MSRB3Q8IXL7 192 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 IGHV5-10-1A0A0J9YXX1 117 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 CCL21O00585 134 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 ACP1P24666 158 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 CD300LDQ6UXZ3 194 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF441Q8N8Z8 693 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 TINAGQ9UJW2 476 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 SPINK2P20155 84 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 TIAL1Q01085 375 aaKnown RBP eCLIP16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 TMEM171Q8WVE6 324 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 MMP26Q9NRE1 261 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 PRSS44E7EML9 344 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF205O95201 554 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 ETFDHQ16134 617 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 CTF1Q16619 201 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 GAB4Q2WGN9 574 aa16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 MUC20Q8N307 709 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-203ENST00000535236 KIAA1324LA8MWY0 1029 aaPredicted RBP16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 CDIPTO14735 213 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 CRYBB2P43320 205 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 ID4P47928 161 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 HIST1H3AP68431 136 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 TMEM37Q8WXS4 190 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 SLC7A10Q9NS82 523 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 TO15178 435 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 BCL3P20749 454 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 SELENOPP49908 381 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 UCNP55089 124 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 DYNLRB2Q8TF09 96 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 ASB5Q8WWX0 329 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 TMUB1Q9BVT8 246 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 WDR13Q9H1Z4 485 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 ZBTB37Q5TC79 503 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 PARD6AQ9NPB6 346 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 STARD10Q9Y365 291 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 CDK2AP1O14519 115 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 HTN1P15515 57 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 CLEC9AQ6UXN8 241 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 BHLHA9Q7RTU4 235 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 TGIF2LYQ8IUE0 185 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 OR4A4PQ8NGN8 299 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 C16orf97H3BN30 126 aa16.03■□□□□ 0.16
SFSWAP-203ENST00000535236 RPS4Y1P22090 263 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 TEX261Q6UWH6 196 aa16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 TBC1D26Q86UD7 250 aa16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 SPICQ8N5J4 248 aa16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 RSRP1Q9BUV0 290 aa16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 SIRT3Q9NTG7 399 aaPredicted RBP16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 U3KQ87 197 aa16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 CD226Q15762 336 aa16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 TECRQ9NZ01 308 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-203ENST00000535236 BMPR1BO00238 502 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 FCN1O00602 326 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 CCL3P10147 92 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 PMELP40967 661 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 RNF212Q495C1 297 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 DUSP15Q9H1R2 295 aaPredicted RBP16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 TMEM167BQ9NRX6 74 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 MMP24Q9Y5R2 645 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 INSIG2Q9Y5U4 225 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 A0A1W2PNV4 684 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 GSTZ1O43708 216 aaPredicted RBP16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 ADAM11O75078 769 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 GZMHP20718 246 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 TOMM20LQ6UXN7 152 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 C17orf47Q8NEP4 570 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 PCOLCE2Q9UKZ9 415 aa16.02■□□□□ 0.15
SFSWAP-203ENST00000535236 PHOX2AO14813 284 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 LIMS2Q7Z4I7 341 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 C5orf17Q8NAS9 161 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 SLC25A40Q8TBP6 338 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 OR2H1Q9GZK4 316 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 GPR35Q9HC97 309 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 PATE3B3GLJ2 98 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 CLDN34H7C241 214 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 CDC42EP2O14613 210 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 MESTQ5EB52 335 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 ATG4DQ86TL0 474 aaPredicted RBP16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 EID2BQ96D98 161 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 SLC52A3Q9NQ40 469 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 MRM2Q9UI43 246 aaKnown RBP16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 CCKARP32238 428 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 ST3GAL2Q16842 350 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 DOLPP1Q86YN1 238 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 C10orf35Q96D05 121 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 CRISPLD2Q9H0B8 497 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 ZNF385DQ9H6B1 395 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 MBD1Q9UIS9 605 aaPredicted RBP16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 IGKV3-7A0A075B6H7 116 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 CTSDP07339 412 aaPredicted RBP16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 RD3LP0DJH9 198 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 IL24Q13007 206 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 HIKESHIQ53FT3 197 aa16.01■□□□□ 0.15
SFSWAP-203ENST00000535236 DCAF10Q5QP82 559 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms