RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 ACACBO00763 2458 aa20.17■□□□□ 0.82
PTPMT1-205ENST00000534775 SNRPGP15A8MWD9 76 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 RBM39Q14498 530 aaKnown RBP20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 CDK10Q15131 360 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 SPIN3Q5JUX0 258 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 C11orf53Q8IXP5 236 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 ST6GAL2Q96JF0 529 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 MRPL37Q9BZE1 423 aaKnown RBP20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 ESRP2Q9H6T0 727 aaKnown RBP20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 CA10Q9NS85 328 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 TAAR3PQ9P1P4 343 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 NDRG3Q9UGV2 375 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 ANXA10Q9UJ72 324 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 DEGS1O15121 323 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 DUSP1P28562 367 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 GRK1Q15835 563 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 PRAMEF6Q5VXH4 476 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 SLC36A1Q7Z2H8 476 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 TERB2Q8NHR7 220 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 NEK7Q8TDX7 302 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 DYRK2Q92630 601 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 GTF3AQ92664 365 aaKnown RBP20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 ELMOD3Q96FG2 381 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 ZNF286AQ9HBT8 521 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 CHMP1AQ9HD42 196 aaPredicted RBP20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 MYOZ1Q9NP98 299 aaPredicted RBP20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 ING3Q9NXR8 418 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 EHFQ9NZC4 300 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 ATP23Q9Y6H3 246 aa20.16■□□□□ 0.82
PTPMT1-205ENST00000534775 POLEQ07864 2286 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 SPTA1P02549 2419 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 IGHV3-64DA0A0J9YX35 117 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 ZSCAN5BA6NJL1 495 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 VSTM5A8MXK1 200 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 SSNA1O43805 119 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 CREBL2O60519 120 aaPredicted RBP20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 ZNF146Q15072 292 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 OVCH2Q7RTZ1 564 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 SUMF2Q8NBJ7 301 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 RIMS4Q9H426 269 aaPredicted RBP20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 HES4Q9HCC6 221 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 GLS2Q9UI32 602 aa20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 ERRFI1Q9UJM3 462 aaPredicted RBP20.15■□□□□ 0.82
PTPMT1-205ENST00000534775 PTBP3O95758 552 aaKnown RBP20.14■□□□□ 0.81
PTPMT1-205ENST00000534775 ZNF44P15621 663 aa20.14■□□□□ 0.81
PTPMT1-205ENST00000534775 EIF2B2P49770 351 aaKnown RBP20.14■□□□□ 0.81
PTPMT1-205ENST00000534775 SRSF7Q16629 238 aaKnown RBP eCLIP20.14■□□□□ 0.81
PTPMT1-205ENST00000534775 ATPAF1Q5TC12 328 aaPredicted RBP20.14■□□□□ 0.81
PTPMT1-205ENST00000534775 WDR82Q6UXN9 313 aa20.14■□□□□ 0.81
PTPMT1-205ENST00000534775 CA5BP1Q8WTZ4 195 aa20.14■□□□□ 0.81
PTPMT1-205ENST00000534775 SEC22CQ9BRL7 303 aa20.14■□□□□ 0.81
PTPMT1-205ENST00000534775 SH2D1BO14796 132 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 HPXP02790 462 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 VSIG10L2P0DP72 767 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 SORDQ00796 357 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 CD83Q01151 205 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 ZNF626Q68DY1 528 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 Q6P435 159 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 SCGB3A2Q96PL1 93 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 DPCDQ9BVM2 203 aaPredicted RBP20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 NECAP2Q9NVZ3 263 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 ATRXP46100 2492 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 hCG_1807616A0A1W2PRN6 198 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 NKX2-6A6NCS4 301 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 OR2AT4A6NND4 320 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 ZNF81P51508 661 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 FCN2Q15485 313 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 MPPED2Q15777 294 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 NCMAPQ5T1S8 102 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 Q6ZS49 121 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 ZNF826PQ6ZT77 177 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 TMED4Q7Z7H5 227 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 KCNJ16Q9NPI9 418 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 UFSP2Q9NUQ7 469 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 C1orf123Q9NWV4 160 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 ZNF69Q9UC07 566 aa20.13■□□□□ 0.81
PTPMT1-205ENST00000534775 TPRP12270 2363 aaKnown RBP20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 IGKV1D-8A0A087WSZ0 117 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 TRAV24A0A0B4J272 114 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 FAM221AA4D161 298 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 A8MV72 311 aaPredicted RBP20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 NAPSAO96009 420 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 TNFSF4P23510 183 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 MDH2P40926 338 aaKnown RBP20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 C4orf46Q504U0 113 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 OR10Z1Q8NGY1 313 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 MEGF10Q96KG7 1140 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 RANGRFQ9HD47 186 aaPredicted RBP20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 ZDHHC8Q9ULC8 765 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 VSIG4Q9Y279 399 aa20.12■□□□□ 0.81
PTPMT1-205ENST00000534775 SDCBPO00560 298 aaPredicted RBP20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 HS3ST1O14792 307 aa20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 ATXN7O15265 892 aaPredicted RBP20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 SPRY3O43610 288 aa20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 GLRA1P23415 457 aa20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 ECI1P42126 302 aa20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 LHFPL1Q86WI0 220 aa20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 TCTE3Q8IZS6 198 aa20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 RDH5Q92781 318 aa20.11■□□□□ 0.81
PTPMT1-205ENST00000534775 MRGPRFQ96AM1 343 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms