RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 COL16A1Q07092 1604 aaPredicted RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 ZC3H12DA2A288 527 aaKnown RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 FBLL1A6NHQ2 334 aaKnown RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 AGRPO00253 132 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 BCAT2O15382 392 aaPredicted RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 MRPL33O75394 65 aaKnown RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 ADH4P08319 380 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 CD38P28907 300 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 GNG3P63215 75 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 GAGE1Q13065 139 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 OLIG3Q7RTU3 272 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 DMBX1Q8NFW5 382 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 CD99L2Q8TCZ2 262 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 DAZAP1Q96EP5 407 aaKnown RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 MACROD1Q9BQ69 325 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 SDF2L1Q9HCN8 221 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 G6PC2Q9NQR9 355 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 RNF186Q9NXI6 227 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 PIGLQ9Y2B2 252 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 A6NDN8 102 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 FAM24AA6NFZ4 105 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 ZFP92A6NM28 416 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 FHITP49789 147 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 UBE2NP61088 152 aaKnown RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 PLCXD3Q63HM9 321 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 OR2A2Q6IF42 318 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 SLC37A2Q8TED4 501 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 STRADBQ9C0K7 418 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 TBL2Q9Y4P3 447 aaKnown RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 HCFC2Q9Y5Z7 792 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 IGLV3-32A0A0A0MS00 114 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 A0A0U1RQK1 487 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 ZNF320A2RRD8 509 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 RPL36A-HNRNPH2H7BZ11 118 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 SIRPB1O00241 398 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 NXPH2O95156 264 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 AMTP48728 403 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 RAB7AP51149 207 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 FMODQ06828 376 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 MGAT2Q10469 447 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 DGAT2L6Q6ZPD8 337 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 AGBL5Q8NDL9 886 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 ZNF845Q96IR2 970 aaPredicted RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 AGMATQ9BSE5 352 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 C5orf66Q9H5L9 145 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 OR2W1Q9Y3N9 320 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 IGKV1D-42A0A075B6H8 117 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 A0A1W2PPC4 97 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 FAM90A9PA6NNJ1 464 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 ARG1P05089 322 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 NR0B2Q15466 257 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 Q6ZSR6 202 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 NFAM1Q8NET5 270 aaPredicted RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 OR51H1Q8NH63 302 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 ROBO4Q8WZ75 1007 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 GCDHQ92947 438 aaPredicted RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 TECRQ9NZ01 308 aaKnown RBP3.56□□□□□ -1.84
SOX6-217ENST00000533870 TRAPPC1Q9Y5R8 145 aa3.56□□□□□ -1.84
SOX6-217ENST00000533870 PRKRAO75569 313 aaKnown RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 PNPP00491 289 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 SRD5A2P31213 254 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 COMPP49747 757 aaPredicted RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 EFNB2P52799 333 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 RAC3P60763 192 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 TMEM187Q14656 261 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 C2orf27AQ580R0 203 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 NCMAPQ5T1S8 102 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 C1orf194Q5T5A4 169 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 RHBDD2Q6NTF9 364 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ATRAIDQ6UW56 229 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 MEX3DQ86XN8 651 aaKnown RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 NHLRC2Q8NBF2 726 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR5A2Q8NGI9 324 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR13G1Q8NGZ3 307 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR4F5Q8NH21 305 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ASB10Q8WXI3 467 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 SLC35E1Q96K37 410 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR4F4Q96R69 305 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 MBD1Q9UIS9 605 aaPredicted RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 KCNS2Q9ULS6 477 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 LIPGQ9Y5X9 500 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 TMEM30CPA0ZSE6 113 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 LMO7DNF2Z398 122 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 SMAD9O15198 467 aaKnown RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 IGHV2-70P01814 119 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 QDPRP09417 244 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ZNF25P17030 456 aaPredicted RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 INSL4Q14641 139 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 MLF2Q15773 248 aaPredicted RBP3.55□□□□□ -1.84
SOX6-217ENST00000533870 TCTN1Q2MV58 587 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ZNF750Q32MQ0 723 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 ANKRD55Q3KP44 614 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 FAM78AQ5JUQ0 283 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 RAET1LQ5VY80 246 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 SLC25A47Q6Q0C1 308 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 MARCH3Q86UD3 253 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 AMER3Q8N944 861 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 OR10AC1Q8NH08 325 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 FOXB1Q99853 325 aa3.55□□□□□ -1.84
SOX6-217ENST00000533870 MESP1Q9BRJ9 268 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms