RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 FAM230AA0A1W2PPH8 454 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 PQLC2LA1A4F0 135 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 PDCD6O75340 191 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 CFDP00746 253 aaPredicted RBP8.32□□□□□ -1.08
CHKA-207ENST00000533728 CSN2P05814 226 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 GLAP06280 429 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 CRHP06850 196 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 PTGER4P35408 488 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 UCP3P55916 312 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 PLCXD3Q63HM9 321 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 ZNF660Q6AZW8 331 aaPredicted RBP8.32□□□□□ -1.08
CHKA-207ENST00000533728 DHRS11Q6UWP2 260 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 MOB3CQ70IA8 216 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 OR5A2Q8NGI9 324 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 THAP6Q8TBB0 222 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 FNDC9Q8TBE3 224 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 GTF3AQ92664 365 aaKnown RBP8.32□□□□□ -1.08
CHKA-207ENST00000533728 TMEM230Q96A57 120 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 WDR89Q96FK6 387 aaPredicted RBP8.32□□□□□ -1.08
CHKA-207ENST00000533728 GMPPAQ96IJ6 420 aaPredicted RBP8.32□□□□□ -1.08
CHKA-207ENST00000533728 POM121L2Q96KW2 1035 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 CMSS1Q9BQ75 279 aaKnown RBP8.32□□□□□ -1.08
CHKA-207ENST00000533728 RTBDNQ9BSG5 229 aaPredicted RBP8.32□□□□□ -1.08
CHKA-207ENST00000533728 PDCD10Q9BUL8 212 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 CALHM2Q9HA72 323 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 NECAP2Q9NVZ3 263 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 EHFQ9NZC4 300 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 ANXA10Q9UJ72 324 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 C14orf166Q9Y224 244 aaKnown RBP8.32□□□□□ -1.08
CHKA-207ENST00000533728 MPC1Q9Y5U8 109 aa8.32□□□□□ -1.08
CHKA-207ENST00000533728 LOC100509620A0A075B734 347 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 KANTRA0A1W2PQU2 76 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 OR5B21A6NL26 309 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 SHOXO15266 292 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 BCL2L11O43521 198 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 F10P00742 488 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 PATE4P0C8F1 98 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 RPS2P15880 293 aaKnown RBP8.31□□□□□ -1.08
CHKA-207ENST00000533728 AKR1C4P17516 323 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 FUT3P21217 361 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 VAMP1P23763 118 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 PSMB6P28072 239 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 TNFSF10P50591 281 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 RBM11P57052 281 aaKnown RBP8.31□□□□□ -1.08
CHKA-207ENST00000533728 ARG2P78540 354 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 SRYQ05066 204 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 MPV17LQ2QL34 196 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 CEACAM21Q3KPI0 293 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 FBXW9Q5XUX1 488 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 C17orf107Q6ZR85 190 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 MRPL21Q7Z2W9 205 aaKnown RBP8.31□□□□□ -1.08
CHKA-207ENST00000533728 C6orf201Q7Z4U5 140 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 MKXQ8IYA7 352 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 ADAD2Q8NCV1 583 aaKnown RBP8.31□□□□□ -1.08
CHKA-207ENST00000533728 OR5M9Q8NGP3 310 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 OR1K1Q8NGR3 316 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 OR10K1Q8NGX5 313 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 OR51F2Q8NH61 342 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 PPP1R1CQ8WVI7 109 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 PIGCQ92535 297 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 BCL2L2Q92843 193 aaPredicted RBP8.31□□□□□ -1.08
CHKA-207ENST00000533728 PIK3IP1Q96FE7 263 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 ST6GALNAC5Q9BVH7 336 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 SLC25A32Q9H2D1 315 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 PLK3Q9H4B4 646 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 ZNF552Q9H707 407 aaPredicted RBP8.31□□□□□ -1.08
CHKA-207ENST00000533728 ZNF286AQ9HBT8 521 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 PLSCR2Q9NRY7 297 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 DNAJB11Q9UBS4 358 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 TP53TG5Q9Y2B4 290 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 MEMO1Q9Y316 297 aa8.31□□□□□ -1.08
CHKA-207ENST00000533728 IGKV1-12A0A0C4DH73 117 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 FAM221AA4D161 298 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 RNF222A6NCQ9 220 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 ARGFXA6NJG6 315 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 SLC22A20A6NK97 555 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 NKX2-8O15522 239 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 SPRY1O43609 319 aaPredicted RBP8.3□□□□□ -1.08
CHKA-207ENST00000533728 CEACAM4O75871 244 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 IGKV1D-12P01611 117 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 FCGR3AP08637 254 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 PET100P0DJ07 73 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 TUBG1P23258 451 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 GABRR1P24046 479 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 APLNRP35414 380 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 NPY4RP50391 375 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 P2RX3P56373 397 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 ARPC4P59998 168 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 FGF12P61328 243 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 RAB1AP62820 205 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
CHKA-207ENST00000533728 NAAAQ02083 359 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 BAMBIQ13145 260 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 TAF9Q16594 264 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 NUFIP2Q7Z417 695 aaKnown RBP8.3□□□□□ -1.08
CHKA-207ENST00000533728 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.3□□□□□ -1.08
CHKA-207ENST00000533728 RTN4RL2Q86UN3 420 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 ZDHHC23Q8IYP9 409 aa8.3□□□□□ -1.08
CHKA-207ENST00000533728 EIF4E3Q8N5X7 224 aaKnown RBP8.3□□□□□ -1.08
CHKA-207ENST00000533728 OR10AD1Q8NGE0 317 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms