RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SLC25A40Q8TBP6 338 aa9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 RPUSD4Q96CM3 377 aaKnown RBP9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 PRO1933Q9H354 126 aa9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 CLN8Q9UBY8 286 aa9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 FZR1Q9UM11 496 aa9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 DTX4Q9Y2E6 619 aa9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 NEUROG3Q9Y4Z2 214 aa9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 FLVCR1Q9Y5Y0 555 aa9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 SPTA1P02549 2419 aa9.91□□□□□ -0.82
AMBRA1-211ENST00000533727 SPRY1O43609 319 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 DXOO77932 396 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 MESTQ5EB52 335 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 TSPO2Q5TGU0 170 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 C11orf87Q6NUJ2 197 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 LINC00596Q86U02 117 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 ARRDC1Q8N5I2 433 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 OR4C16Q8NGL9 310 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 VAMP8Q9BV40 100 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 MMP26Q9NRE1 261 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 THYN1Q9P016 225 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 PCDHGA9Q9Y5G4 932 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 A0A0B4J203 849 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 LIMK1P53667 647 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 RTP5Q14D33 572 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 NCR3LG1Q68D85 454 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 CMTM2Q8TAZ6 248 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 ABHD17AQ96GS6 310 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 ADGRL4Q9HBW9 690 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 LYRM2Q9NU23 88 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 RAXQ9Y2V3 346 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 NPTNQ9Y639 398 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 J3QW42 95 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 OR8G2PQ6IF36 304 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 CCDC144NLQ6NUI1 221 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 CXorf67Q86X51 503 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 POM121L2Q96KW2 1035 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 PIMREGQ9BSJ6 248 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 FAM103A1Q9BTL3 118 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 SLC35D1Q9NTN3 355 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 KLK11Q9UBX7 282 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 RPH3ALQ9UNE2 315 aa9.9□□□□□ -0.82
AMBRA1-211ENST00000533727 PLPP2O43688 288 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 EPXP11678 715 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 ZNF250P15622 560 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 FGF9P31371 208 aaPredicted RBP9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 ACAA2P42765 397 aaKnown RBP9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 RPL11P62913 178 aaKnown RBP9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 C21orf62-AS1Q17RA5 79 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 HIKESHIQ53FT3 197 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 THSD4Q6ZMP0 1018 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 ZFP62Q8NB50 900 aaPredicted RBP9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 ZNF485Q8NCK3 441 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 PARD6AQ9NPB6 346 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 FKBP11Q9NYL4 201 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 ZDHHC8Q9ULC8 765 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.83
AMBRA1-211ENST00000533727 IGLV3-12A0A075B6K2 115 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 F2RL2O00254 374 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 CSN1S1P47710 185 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 TPPP2P59282 170 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 ARL16Q0P5N6 197 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 FAM162BQ5T6X4 162 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 C1QL3Q5VWW1 255 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 MRPL14Q6P1L8 145 aaKnown RBP9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 SPACA3Q8IXA5 215 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 FAM57AQ8TBR7 257 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 ZNF596Q8TC21 504 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 CTHRC1Q96CG8 243 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 TMEFF2Q9UIK5 374 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 NCBP2LA6PVI3 153 aaKnown RBP9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 PYCARD-AS1I3L0S3 204 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 TCAPO15273 167 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 YIF1AO95070 293 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 PTBP3O95758 552 aaKnown RBP9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 COX5BP10606 129 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 SPINK2P20155 84 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 GZMHP20718 246 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 RPL29P47914 159 aaKnown RBP9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 KRTDAPP60985 99 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 GUK1Q16774 197 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 OR4F5Q8NH21 305 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 VSTM2AQ8TAG5 236 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 OR4F4Q96R69 305 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 OPN3Q9H1Y3 402 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 ZDHHC11Q9H8X9 412 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 PPIAL4EA0A075B759 164 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 PPIAL4DF5H284 164 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 AP4M1O00189 453 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 TRAF3IP2O43734 574 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 IGKV3-11P04433 115 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 PPIAL4FP0DN26 164 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 GGNBP1Q5YKI7 109 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 ZNF787Q6DD87 383 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 MIOXQ9UGB7 285 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 MRPS18CQ9Y3D5 142 aaKnown RBP9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 PPIAL4AQ9Y536 164 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 A0A087X0M5 115 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 A0A1B0GX30 115 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 A0A1W2PNV4 684 aa9.89□□□□□ -0.83
AMBRA1-211ENST00000533727 ST3GAL2Q16842 350 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms