RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 TMEFF2Q9UIK5 374 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-232ENST00000532649 NUP214P35658 2090 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-232ENST00000532649 CABIN1Q9Y6J0 2220 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 FAM157AC9JC47 383 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 DGCR2P98153 550 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 TMEM52Q8NDY8 209 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 RXFP4Q8TDU9 374 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 PP6455Q8WZ26 134 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 TM4SF19Q96DZ7 209 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 RABAC1Q9UI14 185 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 CES1P1Q9UKY3 287 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 SLC45A2Q9UMX9 530 aa7.74□□□□□ -1.17
CTNND1-232ENST00000532649 A0A1W2PRD5 423 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 A0A1W2PRF3 423 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 A0A1W2PRM7 423 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 ADAM20O43506 726 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 RNASE1P07998 156 aaKnown RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 FAM87AP0C7U9 286 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 GLI4P10075 376 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 RPL12P30050 165 aaKnown RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 CALCRP30988 508 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 MDH2P40926 338 aaKnown RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 ZNF154Q13106 437 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 SAP25Q8TEE9 199 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 OIT3Q8WWZ8 545 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 FGF11Q92914 225 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 DOK1Q99704 481 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 CABLES2Q9BTV7 478 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 DPH3P1Q9H4G8 78 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 SLC25A22Q9H936 323 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 AMDHD2Q9Y303 409 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 SYNGR2O43760 224 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 GFRA3O60609 400 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 SIX6O95475 246 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 GP1BAP07359 652 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 CCL2P13500 99 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 PTBP1P26599 531 aaKnown RBP eCLIP7.73□□□□□ -1.172e-7■■■■□ 23.9
CTNND1-232ENST00000532649 DDOSTP39656 456 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 KCNJ3P48549 501 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 GNG4P50150 75 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 UBE2MP61081 183 aaKnown RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 GUCA2BQ16661 112 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 FAM27D1Q5T7N8 215 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 NHLRC1Q6VVB1 395 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 C9orf40Q8IXQ3 194 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 C5orf17Q8NAS9 161 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 TET1Q8NFU7 2136 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 OR4C16Q8NGL9 310 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 PRDM14Q9GZV8 571 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 ARID2Q68CP9 1835 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 ACTL6AO96019 429 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 PATE4P0C8F1 98 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 CDKN2AP42771 156 aaKnown RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 PIGPP57054 158 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 ASCL5Q7RTU5 278 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 UNC13CQ8NB66 2214 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 FCGR3BO75015 233 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 CEACAM6P40199 344 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 PPOXP50336 477 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 HLXQ14774 488 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 AMMECR1LQ6DCA0 310 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 CELF2-AS1Q8N7Q2 184 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 ADPRHL1Q8NDY3 354 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 OR5AP2Q8NGF4 316 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 RND1Q92730 232 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 U3KQ87 197 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 BCL3P20749 454 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 CA6P23280 308 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 SULT1A1P50225 295 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 UCNP55089 124 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 GNG3P63215 75 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 ETFDHQ16134 617 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 RNFT1Q5M7Z0 435 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 THSD4Q6ZMP0 1018 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 BHLHA15Q7RTS1 189 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 OR4S1Q8NGB4 309 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 DNASE2BQ8WZ79 361 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 GPX7Q96SL4 187 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 OR2J1Q9GZK6 312 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 CCL27Q9Y4X3 112 aa7.73□□□□□ -1.17
CTNND1-232ENST00000532649 MRPS18BQ9Y676 258 aaKnown RBP7.73□□□□□ -1.17
CTNND1-232ENST00000532649 DEFB108AA8MXU0 73 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 OR2F2O95006 317 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 EPPINO95925 133 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 PRSS1P07477 247 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 OR2F1Q13607 317 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 ZNF528Q3MIS6 628 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 WDR38Q5JTN6 314 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 ZAR1Q86SH2 424 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 COMMD1Q8N668 190 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 GLRX2Q9NS18 164 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 CYSLTR2Q9NS75 346 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 TMEM74BQ9NUR3 256 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 BET1LQ9NYM9 111 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 IL36GQ9NZH8 169 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 CDC42EP2O14613 210 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
CTNND1-232ENST00000532649 FFAR4Q5NUL3 377 aa7.72□□□□□ -1.17
CTNND1-232ENST00000532649 C1QL3Q5VWW1 255 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms