RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ENDOGQ14249 297 aaKnown RBP9.92□□□□□ -0.82
PTPRK-221ENST00000532331 XAF1Q6GPH4 301 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 UBALD1Q8TB05 177 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 KLK13Q9UKR3 277 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 ICAM5Q9UMF0 924 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 PPIAL4AQ9Y536 164 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 NPIPB8E9PQR5 432 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 CHEK1O14757 476 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 LIMK1P53667 647 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 ZNF90Q03938 601 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 LY6DQ14210 128 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 INPP5JQ15735 1006 aaPredicted RBP9.92□□□□□ -0.82
PTPRK-221ENST00000532331 OR2T6Q8NHC8 308 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 ACY3Q96HD9 319 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 C1RLQ9NZP8 487 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 PPP1R2P9O14990 202 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 NDUFB6O95139 128 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 OR2C1O95371 312 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 OR10Z1Q8NGY1 313 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 PCGF1Q9BSM1 259 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 NKX6-2Q9C056 277 aaPredicted RBP9.92□□□□□ -0.82
PTPRK-221ENST00000532331 SLIRPQ9GZT3 109 aaKnown RBP9.92□□□□□ -0.82
PTPRK-221ENST00000532331 ELOVL5Q9NYP7 299 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 MTFP1Q9UDX5 166 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 ZNF230Q9UIE0 474 aaPredicted RBP9.92□□□□□ -0.82
PTPRK-221ENST00000532331 ZNF835Q9Y2P0 537 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 TMED3Q9Y3Q3 217 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 DCTN6O00399 190 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 BCL2L11O43521 198 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 CTAG2O75638 210 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 ZNF658BQ4V348 819 aaPredicted RBP9.92□□□□□ -0.82
PTPRK-221ENST00000532331 Q56UQ5 140 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 TVP23CQ96ET8 276 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 MSL2Q9HCI7 577 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 PSG11Q9UQ72 335 aa9.92□□□□□ -0.82
PTPRK-221ENST00000532331 CDIPTO14735 213 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 LY86O95711 162 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 CCL8P80075 99 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 C6orf201Q7Z4U5 140 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 MRGPRDQ8TDS7 321 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 RPUSD4Q96CM3 377 aaKnown RBP9.91□□□□□ -0.82
PTPRK-221ENST00000532331 RASL11BQ9BPW5 248 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 OTOFQ9HC10 1997 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 IGKV1D-16P01601 117 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 PRSS12P56730 875 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 MPPED2Q15777 294 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 SSX1Q16384 188 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 OR8B12Q8NGG6 310 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 CCL27Q9Y4X3 112 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 H3BP45 60 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 FCGR3BO75015 233 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 CTSBP07858 339 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 PGA3P0DJD8 388 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 SLC25A4P12235 298 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 AKR1C3P42330 323 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 KIR2DS2P43631 304 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 ASCL1P50553 236 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 WDFY2Q96P53 400 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 CNTD2Q9H8S5 307 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 TMEM210A6NLX4 147 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 FAM157AC9JC47 383 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 UPK3AO75631 287 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 CRHP06850 196 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 INSL4Q14641 139 aa9.91□□□□□ -0.82
PTPRK-221ENST00000532331 MRM2Q9UI43 246 aaKnown RBP9.91□□□□□ -0.82
PTPRK-221ENST00000532331 H0Y8G0 127 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 FBP1P09467 338 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 CALCRP30988 508 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 SP6Q3SY56 376 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 APC2O95996 2303 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 UBE2L5PA0A1B0GUS4 154 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 GZMKP49863 264 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 RPL7L1Q6DKI1 246 aaKnown RBP9.9□□□□□ -0.82
PTPRK-221ENST00000532331 C11orf87Q6NUJ2 197 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 CHRDL1Q9BU40 450 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 CACNA1CQ13936 2221 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 IGHV3-43A0A0B4J1X8 118 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 SMAD7O15105 426 aaKnown RBP9.9□□□□□ -0.82
PTPRK-221ENST00000532331 ACSM4P0C7M7 580 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 IGHV3-43DP0DP04 118 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 LPAR6P43657 344 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 PDLIM4P50479 330 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 PDZK1IP1Q13113 114 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 RELL2Q8NC24 303 aaPredicted RBP9.9□□□□□ -0.82
PTPRK-221ENST00000532331 RXFP4Q8TDU9 374 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 SMIM7Q9BQ49 75 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 OR2J1Q9GZK6 312 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.9□□□□□ -0.82
PTPRK-221ENST00000532331 PRSS50Q9UI38 385 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 V9GYS6 101 aa9.9□□□□□ -0.82
PTPRK-221ENST00000532331 ARPC4-TTLL3A0A0A6YYG9 625 aa9.9□□□□□ -0.83
PTPRK-221ENST00000532331 CST7O76096 145 aa9.9□□□□□ -0.83
PTPRK-221ENST00000532331 KIAA0141Q14154 515 aaPredicted RBP9.9□□□□□ -0.83
PTPRK-221ENST00000532331 ST8SIA2Q92186 375 aa9.9□□□□□ -0.83
PTPRK-221ENST00000532331 NUDT16L1Q9BRJ7 211 aaKnown RBP9.9□□□□□ -0.83
PTPRK-221ENST00000532331 OR51I2Q9H344 312 aa9.9□□□□□ -0.83
PTPRK-221ENST00000532331 LPAR3Q9UBY5 353 aa9.9□□□□□ -0.83
PTPRK-221ENST00000532331 ASCC3Q8N3C0 2202 aaKnown RBP9.9□□□□□ -0.83
PTPRK-221ENST00000532331 RFPL4AA6NLU0 287 aa9.9□□□□□ -0.83
PTPRK-221ENST00000532331 RFPL4AL1F8VTS6 287 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms