RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 PARP11Q9NR21 331 aa1.7□□□□□ -2.14
CD44-234ENST00000531873 SDHAF3Q9NRP4 125 aa1.7□□□□□ -2.14
CD44-234ENST00000531873 RWDD2AQ9UIY3 292 aa1.7□□□□□ -2.14
CD44-234ENST00000531873 SETBP1Q9Y6X0 1596 aa1.7□□□□□ -2.14
CD44-234ENST00000531873 IGLV3-12A0A075B6K2 115 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 MYBPHLA2RUH7 354 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 TMEM150BA6NC51 233 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 CEACAM18A8MTB9 384 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 RPL36A-HNRNPH2H7BZ11 118 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 UPK2O00526 184 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 FABP7O15540 132 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 CBR3O75828 277 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 IGKV3-11P04433 115 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 IL4P05112 153 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 SNRPAP09012 282 aaKnown RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 CECR9P0C854 216 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 LIMS3P0CW19 117 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 LIMS4P0CW20 117 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 ZNF35P13682 527 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 RPA3P35244 121 aaPredicted RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 HTR2BP41595 481 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 CRATP43155 626 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 PLTPP55058 493 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 ATP5G2Q06055 141 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 PRDX1Q06830 199 aaKnown RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 BTN1A1Q13410 526 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 FLOT2Q14254 428 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 SSX1Q16384 188 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 RBM48Q5RL73 367 aaKnown RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 TIMM23BQ5SRD1 257 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 MED27Q6P2C8 311 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 PRSS54Q6PEW0 395 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 CLEC18BQ6UXF7 455 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 GALNT10Q86SR1 603 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 CD302Q8IX05 232 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 ZNF615Q8N8J6 731 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 ZDHHC22Q8N966 263 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 SLC26A10Q8NG04 563 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 OR2K2Q8NGT1 345 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 OR5H2Q8NGV7 314 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 FAM45AQ8TCE6 357 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 KLF14Q8TD94 323 aaPredicted RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 CCDC12Q8WUD4 166 aaPredicted RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 NELFBQ8WX92 580 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 CCDC127Q96BQ5 260 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 YIPF6Q96EC8 236 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 HBEGFQ99075 208 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 SUCNR1Q9BXA5 334 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 ZNF717Q9BY31 904 aaPredicted RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 SRRQ9GZT4 340 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 RHOFQ9HBH0 211 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 TMEM38BQ9NVV0 291 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 TAS2R13Q9NYV9 303 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 STX18Q9P2W9 335 aaKnown RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 SLC22A14Q9Y267 594 aa1.69□□□□□ -2.14
CD44-234ENST00000531873 ZNF706Q9Y5V0 76 aaPredicted RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 LRPPRCP42704 1394 aaKnown RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 RPRD2Q5VT52 1461 aaKnown RBP1.69□□□□□ -2.14
CD44-234ENST00000531873 NRCAMQ92823 1304 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 IGHV3OR16-8A0A075B7F1 116 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 A0A1B0GTI1 187 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 TMEM213A2RRL7 107 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 IZUMO1RA6ND01 250 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 FABP12A6NFH5 140 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 C16orf90A8MZG2 172 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 F8VZ95 297 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 H3BP45 60 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 GOLGA8RI6L899 631 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 J3QLI3 93 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 TOR1AO14656 332 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 UBDO15205 165 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 SLC37A4O43826 429 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 MPZL2O60487 215 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 PDCD6O75340 191 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 CDRT1O95170 752 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 CA2P00918 260 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 IGHV1-46P01743 117 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 OR5AC1P0C628 307 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 PMELP40967 661 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 TGM4P49221 684 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 KRTAP10-1P60331 282 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 SKP1P63208 163 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 FAM53BQ14153 422 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 ELOCQ15369 112 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 TMEM241Q24JQ0 296 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 TMEM249Q2WGJ8 235 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 ATP6AP1LQ52LC2 224 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 KPRPQ5T749 579 aaPredicted RBP1.68□□□□□ -2.14
CD44-234ENST00000531873 GLYATQ6IB77 296 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 ZNF773Q6PK81 442 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 TBPL2Q6SJ96 375 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 C16orf47Q6ZP98 133 aaPredicted RBP1.68□□□□□ -2.14
CD44-234ENST00000531873 LINC00596Q86U02 117 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 ZIC4Q8N9L1 334 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 ZFP62Q8NB50 900 aaPredicted RBP1.68□□□□□ -2.14
CD44-234ENST00000531873 ACBD4Q8NC06 268 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 FXYD5Q96DB9 178 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 MRAP2Q96G30 205 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 PGLYRP3Q96LB9 341 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms