RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ERICH4A6NGS2 130 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 FAM90A22PA8MWA6 464 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 E9PQ18 207 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 SIRPB1O00241 398 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 F2RL2O00254 374 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 SH2D1BO14796 132 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 IGKV1D-12P01611 117 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 MT-ND2P03891 347 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 ALPLP05186 524 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 HTR1AP08908 422 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 BLCAPP62952 87 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 EMX1Q04741 257 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-205ENST00000531042 MEDAGQ5VYS4 303 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 Q6ZS46 218 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 RNF144BQ7Z419 303 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 NDUFA11Q86Y39 141 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 OR51A4Q8NGJ6 313 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 OR10AC1Q8NH08 325 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 PYDC1Q8WXC3 89 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 RFT1Q96AA3 541 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 EXOSC4Q9NPD3 245 aaKnown RBP12.68□□□□□ -0.38
CPSF1-205ENST00000531042 HHLA2Q9UM44 414 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 GSTK1Q9Y2Q3 226 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 ORC6Q9Y5N6 252 aa12.68□□□□□ -0.38
CPSF1-205ENST00000531042 J3QLW9 94 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 EI24O14681 340 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 PEX14O75381 377 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 KDM4BO94953 1096 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 OR2H2O95918 312 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 ZNF19P17023 458 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 LMO1P25800 156 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 HTR1DP28221 377 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 ACBD7Q8N6N7 88 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 OR4P4Q8NGL7 312 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 OR13C3Q8NGS6 347 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 CORO2AQ92828 525 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 PELI1Q96FA3 418 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 SPACA5Q96QH8 159 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 OR5M11Q96RB7 305 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 CITED2Q99967 270 aaPredicted RBP12.67□□□□□ -0.38
CPSF1-205ENST00000531042 COMMD4Q9H0A8 199 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 MMP28Q9H239 520 aa12.67□□□□□ -0.38
CPSF1-205ENST00000531042 EXOGQ9Y2C4 368 aaKnown RBP12.67□□□□□ -0.38
CPSF1-205ENST00000531042 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 OR4C45A6NMZ5 311 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 ADARB2-AS1A8MUL3 147 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 OCM2P0CE71 109 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 OCMP0CE72 109 aaPredicted RBP12.66□□□□□ -0.38
CPSF1-205ENST00000531042 VDAC2P45880 294 aaPredicted RBP12.66□□□□□ -0.38
CPSF1-205ENST00000531042 IL18R1Q13478 541 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 ALKBH1Q13686 389 aaKnown RBP12.66□□□□□ -0.38
CPSF1-205ENST00000531042 ZIK1Q3SY52 487 aaPredicted RBP12.66□□□□□ -0.38
CPSF1-205ENST00000531042 ARSJQ5FYB0 599 aaPredicted RBP12.66□□□□□ -0.38
CPSF1-205ENST00000531042 PRAMEF5Q5TYX0 476 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 OR52W1Q6IF63 320 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 BAIAP2L2Q6UXY1 529 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 RTN4RL2Q86UN3 420 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 ABHD12Q8N2K0 398 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 OR5D18Q8NGL1 313 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 OR13C9Q8NGT0 318 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 C4orf36Q96KX1 117 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 GAL3ST2Q9H3Q3 398 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 RHOFQ9HBH0 211 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 TAS2R3Q9NYW6 316 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 PCDHGB5Q9Y5G0 923 aa12.66□□□□□ -0.38
CPSF1-205ENST00000531042 FUOMA2VDF0 154 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 SNTNA6NMZ2 147 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 H3BNX3 289 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 H3BUI4 141 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 XPNPEP2O43895 674 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 CDK2P24941 298 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 GLIPR1P48060 266 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 ALDH3A2P51648 485 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 BDH1Q02338 343 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 AESQ08117 197 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 TMEM95Q3KNT9 176 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 HEPN1Q6WQI6 88 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 SAXO1Q8IYX7 474 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 OR4F17Q8NGA8 305 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 ZNF596Q8TC21 504 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 R3HDM4Q96D70 268 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 LGALS12Q96DT0 336 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 OR4F4Q96R69 305 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 OCSTAMPQ9BR26 566 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 ZCCHC4Q9H5U6 513 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 AASSQ9UDR5 926 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 KIAA2026Q5HYC2 2103 aa12.65□□□□□ -0.38
CPSF1-205ENST00000531042 EBAG9O00559 213 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 IGLV1-47P01700 117 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 PRB2P02812 416 aaPredicted RBP12.64□□□□□ -0.39
CPSF1-205ENST00000531042 ALDOBP05062 364 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 CSN2P05814 226 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 ZNF44P15621 663 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 GABRB1P18505 474 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 GDNFP39905 211 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 SCN1BQ07699 218 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 GALEQ14376 348 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 FBLN7Q53RD9 439 aa12.64□□□□□ -0.39
CPSF1-205ENST00000531042 Q6P435 159 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms