RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 UNC50Q53HI1 259 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 FAM219BQ5XKK7 198 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 HCP5Q6MZN7 132 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 ARL9Q6T311 187 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 C10orf99Q6UWK7 81 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 CMC1Q7Z7K0 106 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 LRRTM1Q86UE6 522 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 PDIK1LQ8N165 341 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 ZNF781Q8N8C0 355 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 ZNRF1Q8ND25 227 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 TMEM54Q969K7 222 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 NABP1Q96AH0 204 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 EMC6Q9BV81 110 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 REEP4Q9H6H4 257 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 METTL8Q9H825 291 aaKnown RBP5.11□□□□□ -1.59
SVIP-204ENST00000530199 ELOVL3Q9HB03 270 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 NRN1Q9NPD7 142 aa5.11□□□□□ -1.59
SVIP-204ENST00000530199 RNF222A6NCQ9 220 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 NUPR2A6NF83 97 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 CLDN24A6NM45 220 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 ZNF726A6NNF4 738 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 K7EQG2 157 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 M0R1W7 72 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 PIAS1O75925 651 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 HTR5AP47898 357 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 CSNK1A1P48729 337 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 GDI2P50395 445 aaKnown RBP5.1□□□□□ -1.59
SVIP-204ENST00000530199 PABPC1L2AQ5JQF8 200 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 CLEC12AQ5QGZ9 265 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 MUC21Q5SSG8 566 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 FAM27D1Q5T7N8 215 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 RNLSQ5VYX0 342 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 ANKRD26P1Q6NSI1 321 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 ERASQ7Z444 233 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 FAM71E2Q8N5Q1 922 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 C19orf18Q8NEA5 215 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 OR4K5Q8NGD3 323 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 OR5D16Q8NGK9 328 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 OR1B1Q8NGR6 318 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 RPS4Y2Q8TD47 263 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 PPCDCQ96CD2 204 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 SLC25A36Q96CQ1 311 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 HAVCR1Q96D42 359 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 OPRPNQ99935 248 aaPredicted RBP5.1□□□□□ -1.59
SVIP-204ENST00000530199 MOB1AQ9H8S9 216 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 ZDHHC18Q9NUE0 388 aa5.1□□□□□ -1.59
SVIP-204ENST00000530199 POLR3HQ9Y535 204 aaPredicted RBP5.1□□□□□ -1.59
SVIP-204ENST00000530199 TRAV38-1A0A0B4J264 116 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 TRIM64CA6NLI5 447 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 DNALI1O14645 258 aaPredicted RBP5.09□□□□□ -1.59
SVIP-204ENST00000530199 ANGPT2O15123 496 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 IDH3BO43837 385 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 OR2T1O43869 369 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 IGHG1P01857 330 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 OR9G9P0C7N8 305 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 CALCBP10092 127 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 NCF2P19878 526 aaPredicted RBP5.09□□□□□ -1.59
SVIP-204ENST00000530199 FASP25445 335 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 PAX6P26367 422 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 SPRP35270 261 aaPredicted RBP5.09□□□□□ -1.59
SVIP-204ENST00000530199 DYNLT3P51808 116 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 NDUFV3P56181 108 aaKnown RBP5.09□□□□□ -1.59
SVIP-204ENST00000530199 SRPXP78539 464 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 SLC25A24Q6NUK1 477 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 RPS27LQ71UM5 84 aaKnown RBP5.09□□□□□ -1.59
SVIP-204ENST00000530199 OLIG3Q7RTU3 272 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 NET1Q7Z628 596 aaPredicted RBP5.09□□□□□ -1.59
SVIP-204ENST00000530199 OSR2Q8N2R0 312 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 Q8NBF4 154 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 KLHL30-AS1Q8NEE0 82 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 OR10AD1Q8NGE0 317 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 OR11L1Q8NGX0 322 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 OR13G1Q8NGZ3 307 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 SFXN5Q8TD22 340 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 GIPC3Q8TF64 312 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 CDKL2Q92772 493 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 PINX1Q96BK5 328 aaKnown RBP5.09□□□□□ -1.59
SVIP-204ENST00000530199 CMBLQ96DG6 245 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 SLC41A3Q96GZ6 507 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 NABP2Q9BQ15 211 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 VNN3Q9NY84 501 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 GLTPQ9NZD2 209 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 LAMP5Q9UJQ1 280 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 EMCNQ9ULC0 261 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.09□□□□□ -1.59
SVIP-204ENST00000530199 WDR45Q9Y484 360 aa5.09□□□□□ -1.59
SVIP-204ENST00000530199 SRRM2Q9UQ35 2752 aaKnown RBP5.09□□□□□ -1.6
SVIP-204ENST00000530199 LRP1BQ9NZR2 4599 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 H3BTX0 84 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 KLHL2O95198 593 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 SERPINE1P05121 402 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 C2P06681 752 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 RBMY1A1P0DJD3 496 aaKnown RBP5.08□□□□□ -1.6
SVIP-204ENST00000530199 HMOX2P30519 316 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 RPS5P46782 204 aaKnown RBP5.08□□□□□ -1.6
SVIP-204ENST00000530199 CEBPDP49716 269 aaPredicted RBP5.08□□□□□ -1.6
SVIP-204ENST00000530199 KIAA0040Q15053 153 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 TMEM41BQ5BJD5 291 aa5.08□□□□□ -1.6
SVIP-204ENST00000530199 C5orf46Q6UWT4 87 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms