RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 FABP6P51161 128 aa13.14□□□□□ -0.31
CCDC90B-213ENST00000529611 C3orf36Q3SXR2 165 aa13.14□□□□□ -0.31
CCDC90B-213ENST00000529611 MBNL2Q5VZF2 373 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-213ENST00000529611 MRGPRGQ86SM5 289 aa13.14□□□□□ -0.31
CCDC90B-213ENST00000529611 LINC00596Q86U02 117 aa13.14□□□□□ -0.31
CCDC90B-213ENST00000529611 C1orf174Q8IYL3 243 aa13.14□□□□□ -0.31
CCDC90B-213ENST00000529611 CHD8Q9HCK8 2581 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 C9orf170A2RU37 121 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 TIMM8AO60220 97 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 AKR1C4P17516 323 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 GCH1P30793 250 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 CCKARP32238 428 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 RAP2BP61225 183 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 BAMBIQ13145 260 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 IL13RA2Q14627 380 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 DCAF12L2Q5VW00 463 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 ZNF660Q6AZW8 331 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 Q6ZR03 302 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 C9orf62Q8N4C0 152 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 TMEM246Q9BRR3 403 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 RHOFQ9HBH0 211 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 POLDIP2Q9Y2S7 368 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 PCNX1Q96RV3 2341 aa13.13□□□□□ -0.31
CCDC90B-213ENST00000529611 IGHV3-64DA0A0J9YX35 117 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 TMEM210A6NLX4 147 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 CDIPTO14735 213 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 SLC22A5O76082 557 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 OR5H8P0DN80 308 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 TAS2R31P59538 309 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 IL13RA1P78552 427 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 TMEM185AQ8NFB2 350 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 TMEM230Q96A57 120 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 RTBDNQ9BSG5 229 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 ZNF286AQ9HBT8 521 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 NECAP2Q9NVZ3 263 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 OPN4Q9UHM6 478 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 HSPB11Q9Y547 144 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 PGA5P0DJD9 388 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 PI3P19957 117 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 CD34P28906 385 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 MPPED2Q15777 294 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 MSMPQ1L6U9 139 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 TMEM128Q5BJH2 165 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 RELL2Q8NC24 303 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 GRPEL2Q8TAA5 225 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 MITD1Q8WV92 249 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 SCGB3A2Q96PL1 93 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 ZNF2Q9BSG1 426 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 LIME1Q9H400 295 aa13.12□□□□□ -0.31
CCDC90B-213ENST00000529611 SHANK1Q9Y566 2161 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 HSPB6O14558 160 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 RGS13O14921 159 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 NAPSAO96009 420 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 CRYAAP02489 173 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 GRPP07492 148 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 GSTT2P0CG29 244 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 VAMP1P23763 118 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 SNRPD2P62316 118 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 DHODHQ02127 395 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 SURF2Q15527 256 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 LY6G6FQ5SQ64 297 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 RGS7BPQ6MZT1 257 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 C11orf88Q6PI97 169 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 Q8IYB0 196 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 SUMF2Q8NBJ7 301 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 NRIP2Q9BQI9 281 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 SPACA1Q9HBV2 294 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 TRAV24A0A0B4J272 114 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 A0A1B0GWJ7 208 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 MCRIP1C9JLW8 97 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 F5H5P2 479 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 RBPJQ06330 500 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 DHRS11Q6UWP2 260 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 WDR13Q9H1Z4 485 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 IFT22Q9H7X7 185 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 MSL2Q9HCI7 577 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 DECR2Q9NUI1 292 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 JKAMPQ9P055 326 aa13.11□□□□□ -0.31
CCDC90B-213ENST00000529611 C1QTNF9BB2RNN3 333 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 DUS4LO95620 317 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 C1QTNF9P0C862 333 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 PPP3CBP16298 524 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 GLRA1P23415 457 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 NKX6-1P78426 367 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 C1QTNF12Q5T7M4 302 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 Q6P435 159 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 Q6ZS49 121 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 ASCC1Q8N9N2 400 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 NEK7Q8TDX7 302 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 CASTOR1Q8WTX7 329 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 PHB2Q99623 299 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 TMPRSS13Q9BYE2 586 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 ELOVL5Q9NYP7 299 aa13.1□□□□□ -0.31
CCDC90B-213ENST00000529611 HS3ST1O14792 307 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms