RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TEX36Q5VZQ5 186 aa20.68■□□□□ 0.9
LDLRAD3-203ENST00000528989 PERPQ96FX8 193 aa20.68■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAAP24Q9BTP7 215 aa20.68■□□□□ 0.9
LDLRAD3-203ENST00000528989 PLEKHJ1Q9NW61 149 aa20.68■□□□□ 0.9
LDLRAD3-203ENST00000528989 A0A1B0GW55 424 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 SH2D1BO14796 132 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DUX4L2P0CJ85 424 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DUX4L3P0CJ86 424 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DUX4L4P0CJ87 422 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DUX4L5P0CJ88 424 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DUX4L6P0CJ89 424 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DUX4L7P0CJ90 424 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 CHATP28329 748 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 ATP5J2P56134 94 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 ZNF260Q3ZCT1 412 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 RAB12Q6IQ22 244 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DUX4L9Q6RFH8 374 aaPredicted RBP20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 FIP1L1Q6UN15 594 aaKnown RBP20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DYRK2Q92630 601 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 TMEM165Q9HC07 324 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 DUX4Q9UBX2 424 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 MAP1AP78559 2803 aaPredicted RBP20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 TANC2Q9HCD6 1990 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 UNC79Q9P2D8 2635 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 TMEM235A6NFC5 223 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 LGALS8O00214 317 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 PSPNO60542 156 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 FUT3P21217 361 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 BTG1P62324 171 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 MPV17LQ2QL34 196 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 NEDD4LQ96PU5 975 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 SULT4A1Q9BR01 284 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 PECRQ9BY49 303 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 CHODLQ9H9P2 273 aa20.67■□□□□ 0.9
LDLRAD3-203ENST00000528989 UBE2QL1A1L167 161 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 IFNL4K9M1U5 179 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 SLC33A1O00400 549 aaPredicted RBP20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 PPIHO43447 177 aaKnown RBP20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 SELLP14151 372 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 MUC1P15941 1255 aaPredicted RBP20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 COL10A1Q03692 680 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM189A2Q15884 450 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 STUMQ69YW2 141 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 SUMF2Q8NBJ7 301 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 CCL13Q99616 98 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 CHST6Q9GZX3 395 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 ZNF222Q9UK12 451 aa20.66■□□□□ 0.9
LDLRAD3-203ENST00000528989 A0A0A6YYH2 397 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 MEIOCA2RUB1 952 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A10PA6NDY2 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A18PA6NE21 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A16PA6NEW6 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A20PA6NIJ5 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 A6NJ64 397 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A8PA6NJQ4 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A7PA6NKC0 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A22PA8MWA6 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A12PA8MX19 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A5PA8MXJ8 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A23PA8MXZ1 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 CLDN25C9JDP6 229 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 J3QRK9 145 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 PDCD6O75340 191 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A15PP0C7V4 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A13PP0C7W8 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A14PP0C7W9 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 FAM90A24PP0C7X0 464 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 HIST1H1DP16402 221 aaKnown RBP20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 RNASE12Q5GAN4 147 aaKnown RBP20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 LINC00596Q86U02 117 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 ZNRF1Q8ND25 227 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 AUNIPQ9H7T9 357 aa20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 RCC2Q9P258 522 aaKnown RBP20.65■□□□□ 0.9
LDLRAD3-203ENST00000528989 TRAV38-1A0A0B4J264 116 aa20.64■□□□□ 0.9
LDLRAD3-203ENST00000528989 SDHCQ99643 169 aaPredicted RBP20.64■□□□□ 0.9
LDLRAD3-203ENST00000528989 TMEM246Q9BRR3 403 aa20.64■□□□□ 0.9
LDLRAD3-203ENST00000528989 ING3Q9NXR8 418 aa20.64■□□□□ 0.9
LDLRAD3-203ENST00000528989 MAB21L2Q9Y586 359 aa20.64■□□□□ 0.9
LDLRAD3-203ENST00000528989 MFNGO00587 321 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 ZNF45Q02386 682 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 GUCA2AQ02747 115 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 PYDC2Q56P42 97 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 LYPD2Q6UXB3 125 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 DCDC5Q6ZRR9 648 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 S100ZQ8WXG8 99 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 DPCDQ9BVM2 203 aaPredicted RBP20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 PPA2Q9H2U2 334 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 IFT22Q9H7X7 185 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 GLS2Q9UI32 602 aa20.64■□□□□ 0.89
LDLRAD3-203ENST00000528989 TMEM82A0PJX8 343 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 ISPDA4D126 451 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 SCGNO76038 276 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 IGHV2-70P01814 119 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 LMO1P25800 156 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 TMEM33P57088 247 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 C17orf107Q6ZR85 190 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 FAM216BQ8N7L0 139 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 ST8SIA4Q92187 359 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 POM121Q96HA1 1249 aa20.63■□□□□ 0.89
LDLRAD3-203ENST00000528989 NUDT16L1Q9BRJ7 211 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms