RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DLX6P56179 175 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 RPL15P61313 204 aaKnown RBP12.64□□□□□ -0.39
CAPN1-213ENST00000527897 ADARB1P78563 741 aaKnown RBP12.64□□□□□ -0.39
CAPN1-213ENST00000527897 IL18R1Q13478 541 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 MED21Q13503 144 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 CDK5R1Q15078 307 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 RPL22L1Q6P5R6 122 aaKnown RBP12.64□□□□□ -0.39
CAPN1-213ENST00000527897 BRICD5Q6PL45 260 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 LHFPL4Q7Z7J7 247 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 C8orf59Q8N0T1 100 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-213ENST00000527897 PARP16Q8N5Y8 322 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 OR13D1Q8NGV5 346 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 OR5R1Q8NH85 324 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 GPR148Q8TDV2 347 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 RGP1Q92546 391 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-213ENST00000527897 TMEM80Q96HE8 168 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 NR1H4Q96RI1 486 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-213ENST00000527897 NKX3-1Q99801 234 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-213ENST00000527897 JAM3Q9BX67 310 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 SLITRK2Q9H156 845 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 DIMT1Q9UNQ2 313 aaKnown RBP12.64□□□□□ -0.39
CAPN1-213ENST00000527897 RNF114Q9Y508 228 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 MMP24Q9Y5R2 645 aa12.64□□□□□ -0.39
CAPN1-213ENST00000527897 MGST3O14880 152 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 CD2P06729 351 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 GNAO1P09471 354 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 OR3A1P47881 315 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 MEF2CQ06413 473 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-213ENST00000527897 LRRC75BQ2VPJ9 315 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 TCF23Q7RTU1 214 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 ZFP41Q8N8Y5 198 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 OR51A2Q8NGJ7 313 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 TNFAIP8L1Q8WVP5 186 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 WFDC12Q8WWY7 111 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 BABAM2Q9NXR7 383 aa12.63□□□□□ -0.39
CAPN1-213ENST00000527897 SIRT4Q9Y6E7 314 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-213ENST00000527897 KIAA2026Q5HYC2 2103 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 PNMA8CA0A1B0GUJ8 204 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 HSPB6O14558 160 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 IGHV1-8P0DP01 117 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 ZP1P60852 638 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 ST3GAL4Q11206 333 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 CCDC58Q4VC31 144 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 OGFRL1Q5TC84 451 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-213ENST00000527897 CRIP3Q6Q6R5 217 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 Q6ZSV7 163 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 SAXO1Q8IYX7 474 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 OR13C5Q8NGS8 318 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 LINC01006Q8NI28 216 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 GGHQ92820 318 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 TMEM106AQ96A25 262 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 ORAI1Q96D31 301 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 CPNE2Q96FN4 548 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-213ENST00000527897 AJUBAQ96IF1 538 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 VCXQ9H320 206 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 LINC00312Q9Y6C7 94 aa12.62□□□□□ -0.39
CAPN1-213ENST00000527897 PKD1L1Q8TDX9 2849 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 DEGS1O15121 323 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 XPNPEP2O43895 674 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 LALBAP00709 142 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 TGFBR2P37173 567 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 P2RX3P56373 397 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 PPP3R1P63098 170 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 AESQ08117 197 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 ATXN7L3Q14CW9 347 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-213ENST00000527897 RSU1Q15404 277 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 FAM189A2Q15884 450 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 AHSA2Q719I0 299 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 STX19Q8N4C7 294 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 BPIFB6Q8NFQ5 453 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 OR10K1Q8NGX5 313 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 SMIM19Q96E16 107 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 MEGF9Q9H1U4 602 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 SEBOXQ9HB31 216 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-213ENST00000527897 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
CAPN1-213ENST00000527897 TRGV10A0A0A0MS01 117 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 A0A0G2JK05 382 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 FUOMA2VDF0 154 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 FAM172BPA6NC97 362 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 EFCAB10A6NFE3 127 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 GABRPO00591 440 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 CLPXO76031 633 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 ALX3O95076 343 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 RBP4P02753 201 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 GLIPR1P48060 266 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 SSX2Q16385 188 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 KRBOX4Q5JUW0 171 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 PRAMEF5Q5TYX0 476 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 OR52N1Q8NH53 320 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 NDNFQ8TB73 568 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 GHSRQ92847 366 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 RHOFQ9HBH0 211 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 ABCB10Q9NRK6 738 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 ING4Q9UNL4 249 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 SESN1Q9Y6P5 492 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 HSPE1-MOB4S4R3N1 261 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 TRRAPQ9Y4A5 3859 aa12.6□□□□□ -0.39
CAPN1-213ENST00000527897 H0YJX3 145 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 SLC33A1O00400 549 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-213ENST00000527897 MYL12BO14950 172 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms