RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 GPR176Q14439 515 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 CEACAM16Q2WEN9 425 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 TMEM215Q68D42 235 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 GLYATQ6IB77 296 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 ZNF773Q6PK81 442 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 UGT2A3Q6UWM9 527 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 DPPA2Q7Z7J5 298 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 RAD51AP1Q96B01 352 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 PYURFQ96I23 114 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 PRORYQ9H606 182 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 PLEKHA1Q9HB21 404 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 RABL2AQ9UBK7 228 aaPredicted RBP1.6□□□□□ -2.15
CD44-215ENST00000525241 FADS3Q9Y5Q0 445 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 LTBP2Q14767 1821 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 CACNA1GO43497 2377 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 TVP23AA6NH52 213 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 K7EN84 100 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 UPK2O00526 184 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 MBP02144 154 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 CTLA4P16410 223 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 CNTFRP26992 372 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 KRTAP12-1P59990 96 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 ZNF738Q8NE65 137 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 OR2M3Q8NG83 312 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 OR4A15Q8NGL6 344 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 FAM131CQ96AQ9 280 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 NAP1L5Q96NT1 182 aaPredicted RBP1.59□□□□□ -2.15
CD44-215ENST00000525241 ZNF436Q9C0F3 470 aaPredicted RBP1.59□□□□□ -2.15
CD44-215ENST00000525241 WDR55Q9H6Y2 383 aaPredicted RBP1.59□□□□□ -2.15
CD44-215ENST00000525241 TDRD3Q9H7E2 651 aaKnown RBP1.59□□□□□ -2.15
CD44-215ENST00000525241 ZNF337Q9Y3M9 751 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 U3KQK5 164 aa1.59□□□□□ -2.15
CD44-215ENST00000525241 VWA8A3KMH1 1905 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 CD300LBA8K4G0 201 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 KDELR3O43731 214 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 SOD3P08294 240 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 GTF2F2P13984 249 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 CRABP2P29373 138 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 LYZL2Q7Z4W2 148 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 GALNT10Q86SR1 603 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 ATPAF2Q8N5M1 289 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 CCL17Q92583 94 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 MAL2Q969L2 176 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 FMC1Q96HJ9 113 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 OR5V1Q9UGF6 321 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 V9GYY9 64 aa1.58□□□□□ -2.16
CD44-215ENST00000525241 KIF27Q86VH2 1401 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 DYSFO75923 2080 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 TMEM131Q92545 1883 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 VWDEQ8N2E2 1590 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 A0A1B0GXF2 115 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 CD8AP01732 235 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 OPN1SWP03999 348 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 CECR9P0C854 216 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 ZNF22P17026 224 aaPredicted RBP1.57□□□□□ -2.16
CD44-215ENST00000525241 M6PRP20645 277 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 CSRP1P21291 193 aaKnown RBP1.57□□□□□ -2.16
CD44-215ENST00000525241 HTR2CP28335 458 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 ARR3P36575 388 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 BNIP2Q12982 314 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 CASP8Q14790 479 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 BCL2A1Q16548 175 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 ERICH5Q6P6B1 374 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 TPGS1Q6ZTW0 290 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 MARCH3Q86UD3 253 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 CYP4Z1Q86W10 505 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 HS3ST5Q8IZT8 346 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 FAM184AQ8NB25 1140 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 OR10D4PQ8NGN7 298 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 OR6K3Q8NGY3 331 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 ADTRPQ96IZ2 230 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 UTP23Q9BRU9 249 aaKnown RBP1.57□□□□□ -2.16
CD44-215ENST00000525241 MAP1LC3CQ9BXW4 147 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 GAL3ST2Q9H3Q3 398 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 POMKQ9H5K3 350 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 ACOT13Q9NPJ3 140 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 NAGKQ9UJ70 344 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 C14orf166Q9Y224 244 aaKnown RBP1.57□□□□□ -2.16
CD44-215ENST00000525241 SLC22A14Q9Y267 594 aa1.57□□□□□ -2.16
CD44-215ENST00000525241 A6NED7 52 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 G3V3Q6 166 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 PRMT5O14744 637 aaPredicted RBP1.56□□□□□ -2.16
CD44-215ENST00000525241 PDYNP01213 254 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 CRYGCP07315 174 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 SCGB1C2P0DMR2 95 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 ZNF83P51522 516 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 CCL23P55773 120 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 ZNF321PQ8N8H1 164 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 OR51Q1Q8NH59 317 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 SCGB1C1Q8TD33 95 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 OR8B2Q96RD0 313 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 OR2D2Q9H210 308 aa1.56□□□□□ -2.16
CD44-215ENST00000525241 COL5A3P25940 1745 aaPredicted RBP1.56□□□□□ -2.16
CD44-215ENST00000525241 RBFOX3A6NFN3 312 aa1.55□□□□□ -2.16
CD44-215ENST00000525241 CD99P14209 185 aa1.55□□□□□ -2.16
CD44-215ENST00000525241 GABRA1P14867 456 aa1.55□□□□□ -2.16
CD44-215ENST00000525241 IL12BP29460 328 aa1.55□□□□□ -2.16
CD44-215ENST00000525241 COILP38432 576 aaPredicted RBP1.55□□□□□ -2.16
CD44-215ENST00000525241 XKP51811 444 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms