RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CAPSLQ8WWF8 208 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 STMN2Q93045 179 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 MYDGFQ969H8 173 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF286AQ9HBT8 521 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 IGKV1-12A0A0C4DH73 117 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 TRBV2A0A0J9YWF9 115 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 FAM90A22PA8MWA6 464 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 MGST3O14880 152 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 OR2H2O95918 312 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 CYB5AP00167 134 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 IGKV1D-12P01611 117 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 IGHV3-7P01780 117 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 ALDOBP05062 364 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF20P17024 532 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 ATF1P18846 271 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 RBP2P50120 134 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 DEFB121Q5J5C9 76 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 C11orf87Q6NUJ2 197 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 FAM220AQ7Z4H9 259 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 EME1Q96AY2 570 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 NEK6Q9HC98 313 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 EXOSC4Q9NPD3 245 aaKnown RBP12.32□□□□□ -0.44
MRPS28-209ENST00000522987 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
MRPS28-209ENST00000522987 TRGV10A0A0A0MS01 117 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 OCM2P0CE71 109 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF44P15621 663 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 HOXD3P31249 432 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-209ENST00000522987 OR3A4PP47883 348 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 IL18R1Q13478 541 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 ATXN7L3Q14CW9 347 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-209ENST00000522987 ZDHHC13Q8IUH4 622 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 Q8IYB0 196 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 ENTHD1Q8IYW4 607 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 OR51A4Q8NGJ6 313 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 OR13C9Q8NGT0 318 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-209ENST00000522987 HMG20AQ9NP66 347 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF281Q9Y2X9 895 aa12.31□□□□□ -0.44
MRPS28-209ENST00000522987 UBE2J1Q9Y385 318 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-209ENST00000522987 WI2-2373I1.2A0A1W2PRP0 233 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 SAC3D1A6NKF1 404 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 HSPB6O14558 160 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 SH2D1BO14796 132 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 UBCP0CG48 685 aaKnown RBP12.3□□□□□ -0.44
MRPS28-209ENST00000522987 NFYBP25208 207 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 FASP25445 335 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 BRS3P32247 399 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 NANOS3P60323 173 aaKnown RBP12.3□□□□□ -0.44
MRPS28-209ENST00000522987 KRTAP10-11P60412 298 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 PDZK1IP1Q13113 114 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 KPNB1Q14974 876 aaKnown RBP12.3□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF146Q15072 292 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 OR2G2Q8NGZ5 317 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 PP6455Q8WZ26 134 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 OPALINQ96PE5 141 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 GABARAPL1Q9H0R8 117 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 PPIL3Q9H2H8 161 aaKnown RBP12.3□□□□□ -0.44
MRPS28-209ENST00000522987 GLS2Q9UI32 602 aa12.3□□□□□ -0.44
MRPS28-209ENST00000522987 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
MRPS28-209ENST00000522987 COL7A1Q02388 2944 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 TOR1AO14656 332 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 SULT1C4O75897 302 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 AMY1AP04745 511 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 AMY2AP04746 511 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 LTC4SQ16873 150 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 TPTE2P1Q5T6R2 138 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 ZBTB49Q6ZSB9 765 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 LHFPL2Q6ZUX7 228 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 DNAAF1Q8NEP3 725 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 WFDC9Q8NEX5 89 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 OR13C3Q8NGS6 347 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF596Q8TC21 504 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 LEAP2Q969E1 77 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 COQ2Q96H96 371 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 GAL3ST2Q9H3Q3 398 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 LIN7BQ9HAP6 207 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 FRRS1LQ9P0K9 344 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 AASSQ9UDR5 926 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 AP4S1Q9Y587 144 aa12.29□□□□□ -0.44
MRPS28-209ENST00000522987 ODAMA1E959 279 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 LEUTXA8MZ59 168 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 H3BUI4 141 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 PRKACBP22694 351 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 ISL1P61371 349 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 SLC35A2P78381 396 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 BDH1Q02338 343 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 KRBOX4Q5JUW0 171 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 SPIN3Q5JUX0 258 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 TMEM244Q5VVB8 128 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 LPCAT4Q643R3 524 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 OR52W1Q6IF63 320 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 HEPN1Q6WQI6 88 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 C18orf65Q6ZTR6 163 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF329Q86UD4 541 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 OR4X2Q8NGF9 303 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
MRPS28-209ENST00000522987 RBM14Q96PK6 669 aaKnown RBP12.28□□□□□ -0.44
MRPS28-209ENST00000522987 NR1H4Q96RI1 486 aaPredicted RBP12.28□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF649Q9BS31 505 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms