RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ZNF689Q96CS4 500 aaPredicted RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 SLC45A3Q96JT2 553 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 OR52B2Q96RD2 323 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 PLEKHF1Q96S99 279 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 CMSS1Q9BQ75 279 aaKnown RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 ZNF2Q9BSG1 426 aaPredicted RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 SLC25A22Q9H936 323 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 PARVAQ9NVD7 372 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 CTSZQ9UBR2 303 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 HES2Q9Y543 173 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 FLVCR1Q9Y5Y0 555 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 CHD2O14647 1828 aaKnown RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 NUP155O75694 1391 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 FAM159BA6NKW6 160 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 FAM183AA6NL82 134 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 GCM2O75603 506 aaPredicted RBP3.03□□□□□ -1.92
SKP1-209ENST00000522552 ARL6IP5O75915 188 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 IFNA1P01562 189 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 CRABP1P29762 137 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 AGTR1P30556 359 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 CDKN2AP42771 156 aaKnown RBP3.03□□□□□ -1.92
SKP1-209ENST00000522552 GZMMP51124 257 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 GNG3P63215 75 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 CXCL6P80162 114 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 GTF2BQ00403 316 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 FLI1Q01543 452 aaPredicted RBP3.03□□□□□ -1.92
SKP1-209ENST00000522552 EIF4EBP2Q13542 120 aaPredicted RBP3.03□□□□□ -1.92
SKP1-209ENST00000522552 APOFQ13790 326 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 C1DQ13901 141 aaKnown RBP3.03□□□□□ -1.92
SKP1-209ENST00000522552 CDK10Q15131 360 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 RBMY1FQ15415 496 aaKnown RBP3.03□□□□□ -1.92
SKP1-209ENST00000522552 PRR30Q53SZ7 412 aaPredicted RBP3.03□□□□□ -1.92
SKP1-209ENST00000522552 LRRC10Q5BKY1 277 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 C11orf87Q6NUJ2 197 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 PAMR1Q6UXH9 720 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 C2orf66Q6UXQ4 117 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 NEGR1Q7Z3B1 354 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 GALNT10Q86SR1 603 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 OR10G9Q8NGN4 311 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 RXFP4Q8TDU9 374 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 TMBIM1Q969X1 311 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 SMIM8Q96KF7 97 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 KIFC1Q9BW19 673 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 SFXN3Q9BWM7 321 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 SLC25A31Q9H0C2 315 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 MIXL1Q9H2W2 232 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 ZDHHC11Q9H8X9 412 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 ENY2Q9NPA8 101 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 DOK5Q9P104 306 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 PCYOX1Q9UHG3 505 aa3.03□□□□□ -1.92
SKP1-209ENST00000522552 CARHSP1Q9Y2V2 147 aaKnown RBP3.03□□□□□ -1.92
SKP1-209ENST00000522552 A0A0G2JMP0 313 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 OR4C46A6NHA9 309 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 EDIL3O43854 480 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 OR7C1O76099 320 aaPredicted RBP3.02□□□□□ -1.93
SKP1-209ENST00000522552 S1PR2O95136 353 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 FABP3P05413 133 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 GIPP09681 153 aaPredicted RBP3.02□□□□□ -1.93
SKP1-209ENST00000522552 CYBAP13498 195 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 CDKN2BP42772 138 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 OR1E2P47887 323 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 CCL23P55773 120 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 RBX1P62877 108 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 MS4A2Q01362 244 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 EMX1Q04741 257 aaPredicted RBP3.02□□□□□ -1.93
SKP1-209ENST00000522552 ARFRP1Q13795 201 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 TSNQ15631 228 aaKnown RBP3.02□□□□□ -1.93
SKP1-209ENST00000522552 Q499Y3 187 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 HES5Q5TA89 166 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 ELP2Q6IA86 826 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 STRADAQ7RTN6 431 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 PRIMA1Q86XR5 153 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 LINC00337Q8N6G1 96 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 OR4M2Q8NGB6 313 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 OR52N1Q8NH53 320 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 COQ8AQ8NI60 647 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 KCTD4Q8WVF5 259 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 BORCS5Q969J3 196 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 ZHX1-C8orf76Q96EF9 292 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 FAM210BQ96KR6 192 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 RNF157Q96PX1 679 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 C19orf24Q9BVV8 132 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 TRIM4Q9C037 500 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 SPNS1Q9H2V7 528 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 ZSCAN16Q9H4T2 348 aaPredicted RBP3.02□□□□□ -1.93
SKP1-209ENST00000522552 FGF22Q9HCT0 170 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 IDI2-AS1Q9NZ38 188 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 OPTCQ9UBM4 332 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 OR51B4Q9Y5P0 310 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 PALLDQ8WX93 1383 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 NRCAMQ92823 1304 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 MYO15BQ96JP2 1530 aa3.02□□□□□ -1.93
SKP1-209ENST00000522552 SCN5AQ14524 2016 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 IGLV8-61A0A075B6I0 122 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 IGKV1-27A0A075B6S5 117 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 TEX50A0A1B0GTY4 177 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 PRSS44E7EML9 344 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 TSTD3H0UI37 97 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 K7EQS6 105 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SOCS3O14543 225 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms