RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 D2HGDHQ8N465 521 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 PRRG2O14669 202 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 HPP00738 406 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 SNRPEP62304 92 aaKnown RBP12.19□□□□□ -0.46
SYNPO-205ENST00000522122 DMWDQ09019 674 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 OR10X1Q8NGY0 326 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 PLA2G3Q9NZ20 509 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 KLK13Q9UKR3 277 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 A0A1W2PQF6 199 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 CLDN34H7C241 214 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 UBE2G2P60604 165 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 RNPS1Q15287 305 aaKnown RBP12.18□□□□□ -0.46
SYNPO-205ENST00000522122 SLC26A10Q8NG04 563 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 TAAR3PQ9P1P4 343 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 VSIG4Q9Y279 399 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 VWA8A3KMH1 1905 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.18□□□□□ -0.46
SYNPO-205ENST00000522122 CPEB3Q8NE35 698 aaKnown RBP12.18□□□□□ -0.46
SYNPO-205ENST00000522122 OR5B3Q8NH48 314 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
SYNPO-205ENST00000522122 SEC11CQ9BY50 192 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 CTDSP1Q9GZU7 261 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 ARRDC1-AS1Q9H2J1 176 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 M0R1B8 84 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 ADH4P08319 380 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 HOXD4P09016 255 aaPredicted RBP12.18□□□□□ -0.46
SYNPO-205ENST00000522122 FGF2P09038 288 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 CA6P23280 308 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 CEACAM6P40199 344 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 PRSS12P56730 875 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 PRR13Q9NZ81 148 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 APC2O95996 2303 aa12.18□□□□□ -0.46
SYNPO-205ENST00000522122 PHOX2AO14813 284 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 GPR37O15354 613 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 NTF3P20783 257 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.17□□□□□ -0.46
SYNPO-205ENST00000522122 MED19A0JLT2 244 aaPredicted RBP12.17□□□□□ -0.46
SYNPO-205ENST00000522122 MICBQ29980 383 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
SYNPO-205ENST00000522122 C10orf35Q96D05 121 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 ZNF251Q9BRH9 671 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 ZDHHC11Q9H8X9 412 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 OCIAD1Q9NX40 245 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 ZNF586Q9NXT0 402 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 H2BFSP57053 126 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 MLF1P58340 268 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 RPS16P62249 146 aaKnown RBP12.17□□□□□ -0.46
SYNPO-205ENST00000522122 POLR2GP62487 172 aaKnown RBP eCLIP12.17□□□□□ -0.46
SYNPO-205ENST00000522122 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
SYNPO-205ENST00000522122 CACNG5Q9UF02 275 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 OR10V1Q8NGI7 309 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 SLC35D1Q9NTN3 355 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 ATP23Q9Y6H3 246 aa12.17□□□□□ -0.46
SYNPO-205ENST00000522122 SLC38A11Q08AI6 406 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 SFTPA2Q8IWL1 248 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 M0R1X1 148 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 LPAR6P43657 344 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 UCK1Q9HA47 277 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 SVILO95425 2214 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 A0A1W2PPC1 479 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 HEXAP06865 529 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 IL9P15248 144 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 SSTP61278 116 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 MGAT2Q10469 447 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 TSPO2Q5TGU0 170 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 WDR74Q6RFH5 385 aaPredicted RBP12.16□□□□□ -0.46
SYNPO-205ENST00000522122 CLEC9AQ6UXN8 241 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 C9orf40Q8IXQ3 194 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 SF3B5Q9BWJ5 86 aaKnown RBP12.16□□□□□ -0.46
SYNPO-205ENST00000522122 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 OR5B21A6NL26 309 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 H0Y8G0 127 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 ZNF17P17021 662 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 CALCRP30988 508 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 MEOX2P50222 304 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 SSPNQ14714 243 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 CXorf67Q86X51 503 aaPredicted RBP12.16□□□□□ -0.46
SYNPO-205ENST00000522122 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 CTHRC1Q96CG8 243 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 PLPPR2Q96GM1 343 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 GDF15Q99988 308 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 LPAR3Q9UBY5 353 aa12.16□□□□□ -0.46
SYNPO-205ENST00000522122 CT45A10P0DMU9 189 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 SPP1P10451 314 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 ZNF66Q6ZN08 573 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 LIAT1Q6ZQX7 453 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 ADAT3Q96EY9 351 aaPredicted RBP12.15□□□□□ -0.46
SYNPO-205ENST00000522122 SCARF2Q96GP6 870 aaPredicted RBP12.15□□□□□ -0.46
SYNPO-205ENST00000522122 RPS11P62280 158 aaKnown RBP eCLIP12.15□□□□□ -0.46
SYNPO-205ENST00000522122 LINC01590Q5TEZ4 76 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 CYC1P08574 325 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
SYNPO-205ENST00000522122 SLC36A1Q7Z2H8 476 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 MRPS18BQ9Y676 258 aaKnown RBP12.15□□□□□ -0.46
SYNPO-205ENST00000522122 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 CCL2P13500 99 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 BPIFB3P59826 476 aa12.15□□□□□ -0.46
SYNPO-205ENST00000522122 IL24Q13007 206 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms