RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TMIGD2Q96BF3 282 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 SLC25A44Q96H78 314 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-213ENST00000519553 TSGA10Q9BZW7 698 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 ZNHIT6Q9NWK9 470 aaKnown RBP2.37□□□□□ -2.03
PTPN12-213ENST00000519553 IFNKQ9P0W0 207 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 ANXA10Q9UJ72 324 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 FLVCR2Q9UPI3 526 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 A0A0B4J2C4 111 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 MYBPHLA2RUH7 354 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 TCAPO15273 167 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 KDELR3O43731 214 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 RLN2P04090 185 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 TAC1P20366 129 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 DHRS2Q13268 280 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 HNRNPA1L2Q32P51 320 aaKnown RBP2.36□□□□□ -2.03
PTPN12-213ENST00000519553 CLEC12AQ5QGZ9 265 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 TCF24Q7RTU0 167 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 ATP6V1G3Q96LB4 118 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 OR2M4Q96R27 311 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 RBM12B-AS1Q9P1G2 102 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 GMEB1Q9Y692 573 aa2.36□□□□□ -2.03
PTPN12-213ENST00000519553 BRD4O60885 1362 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-213ENST00000519553 LOC100506127A0A0U1RQW1 187 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 SLC5A10A0PJK1 596 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 TVP23AA6NH52 213 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 LEUTXA8MZ59 168 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 HSBP1L1C9JCN9 74 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 F5H5P2 479 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 K7EN84 100 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 K7ERQ8 282 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 K7ERS5 55 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 GYG2O15488 501 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 COX7A2P2O60397 106 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 CEACAM16Q2WEN9 425 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 Q3ZCU0 254 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 Q499Y3 187 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 ATP6AP1LQ52LC2 224 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 SPNS3Q6ZMD2 512 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 SPATA24Q86W54 205 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 Q8NAQ8 132 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 C2orf15Q8WU43 125 aaKnown RBP2.35□□□□□ -2.03
PTPN12-213ENST00000519553 C22orf15Q8WYQ4 148 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 OR5P3Q8WZ94 311 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 FAM131CQ96AQ9 280 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 MSANTD3Q96H12 275 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 TRIB3Q96RU7 358 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 CHMP4BQ9H444 224 aaKnown RBP2.35□□□□□ -2.03
PTPN12-213ENST00000519553 AGPAT3Q9NRZ7 376 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 NUP205Q92621 2012 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 ITGB4P16144 1822 aa2.35□□□□□ -2.03
PTPN12-213ENST00000519553 A0A1B0GU33 70 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 FFAR1O14842 300 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 CETN3O15182 167 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 ZNF73O43830 326 aaPredicted RBP2.34□□□□□ -2.03
PTPN12-213ENST00000519553 CDS2O95674 445 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 MBP02144 154 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 CTSGP08311 255 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 STAG3L2P0CL84 134 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 HOXB8P17481 243 aaPredicted RBP2.34□□□□□ -2.03
PTPN12-213ENST00000519553 GPR4P46093 362 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 BPIFB6Q8NFQ5 453 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 YPEL4Q96NS1 127 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 PRORYQ9H606 182 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 SDHAF3Q9NRP4 125 aa2.34□□□□□ -2.03
PTPN12-213ENST00000519553 BZW2Q9Y6E2 419 aaKnown RBP2.34□□□□□ -2.03
PTPN12-213ENST00000519553 AQRO60306 1485 aaKnown RBP eCLIP2.33□□□□□ -2.049e-10■■□□□ 13
PTPN12-213ENST00000519553 GSTTP1A0A1W2PQM5 241 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 H3BMM0 161 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 PSMD11O00231 422 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 SLC31A1O15431 190 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 APOA1P02647 267 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 TMEM215Q68D42 235 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 SLC25A25Q6KCM7 469 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 DPPA2Q7Z7J5 298 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 FAM58AQ8N1B3 248 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 APOBEC3DQ96AK3 386 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-213ENST00000519553 UBE2WQ96B02 151 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 MAP1LC3CQ9BXW4 147 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 GABARAPL1Q9H0R8 117 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 V9GYY9 64 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 LTBP2Q14767 1821 aa2.33□□□□□ -2.04
PTPN12-213ENST00000519553 C17orf51A8MQB3 221 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 PSCAO43653 123 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 E2F6O75461 281 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 PTNP21246 168 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 XIAPP98170 497 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 TPBGQ13641 420 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 STK38Q15208 465 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 SYCP1Q15431 976 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 HSP90AA4PQ58FG1 418 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 TTMPQ5BVD1 217 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 ZNF773Q6PK81 442 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 UGT2A3Q6UWM9 527 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 CYHR1Q6ZMK1 362 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 TMPPEQ6ZT21 453 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 TRIML2Q8N7C3 387 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 CCL17Q92583 94 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 ADTRPQ96IZ2 230 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 HIGD2AQ9BW72 106 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 WDR55Q9H6Y2 383 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms