RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 SMIM21Q3B7S5 101 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 CHRFAM7AQ494W8 412 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 SHEQ5VZ18 495 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 ADAM5Q6NVV9 412 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 IDO2Q6ZQW0 420 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 FAM90A1Q86YD7 464 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 OR5AP2Q8NGF4 316 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 LINC01560Q8TB33 94 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 NEK7Q8TDX7 302 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 CNTNAP3BQ96NU0 1288 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 OR2V2Q96R30 315 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 ST6GALNAC5Q9BVH7 336 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 CNTNAP3Q9BZ76 1288 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 ZNF286AQ9HBT8 521 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 C1orf123Q9NWV4 160 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 TREM2Q9NZC2 230 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 RNF115Q9Y4L5 304 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 ALG5Q9Y673 324 aa12.75□□□□□ -0.37
TRAPPC9-205ENST00000518839 CHD3Q12873 2000 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 HMX3A6NHT5 357 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 SHISA9B4DS77 424 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 ARPC1BO15143 372 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 SPRY3O43610 288 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 KNG1P01042 644 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 IL5P05113 134 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 CD55P08174 381 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 ZNF44P15621 663 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 GLRA1P23415 457 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 ARPC4P59998 168 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 TNFAIP6P98066 277 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 TFF3Q07654 80 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 GRK1Q15835 563 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 IGFBP7Q16270 282 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 MICBQ29980 383 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 Q6P435 159 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 Q6ZS49 121 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 MED30Q96HR3 178 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 SLC6A7Q99884 636 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 SEBOXQ9HB31 216 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 GPN1Q9HCN4 374 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 UFSP2Q9NUQ7 469 aa12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-205ENST00000518839 TRBV6-6A0A0A6YYG2 114 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 A0A0B4J293 547 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 M0R233 179 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 IGHV1-46P01743 117 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 PMP2P02689 132 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 TNFRSF1AP19438 455 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 APOBEC3AP31941 199 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 SERPINF1P36955 418 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ECI1P42126 302 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 RAB25P57735 213 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 PDCD1Q15116 288 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 CDK10Q15131 360 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 TESK1Q15569 626 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 EFNB3Q15768 340 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 MPPED2Q15777 294 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 SCGB2B2Q4G0G5 96 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 METTL11BQ5VVY1 283 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ACP7Q6ZNF0 438 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ZNF826PQ6ZT77 177 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 AKAP14Q86UN6 197 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 DMRTC2Q8IXT2 367 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ZDHHC22Q8N966 263 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 OR11L1Q8NGX0 322 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 LRRC29Q8WV35 223 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 CCDC107Q8WV48 283 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ITLN1Q8WWA0 313 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 SCGB3A2Q96PL1 93 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 NEURL2Q9BR09 285 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 DPCDQ9BVM2 203 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 PPA2Q9H2U2 334 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 CHMP1AQ9HD42 196 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ETAA1Q9NY74 926 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ZNF581Q9P0T4 197 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 IL36RNQ9UBH0 155 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ANXA10Q9UJ72 324 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 MGAT4AQ9UM21 535 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 ACACBO00763 2458 aa12.73□□□□□ -0.37
TRAPPC9-205ENST00000518839 DIDO1Q9BTC0 2240 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 TRAV24A0A0B4J272 114 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 C17orf100A8MU93 164 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 SRRM5B3KS81 715 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 B9A039 149 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 IFNL4K9M1U5 179 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 OR2H2O95918 312 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 HAND1O96004 215 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 NAPSAO96009 420 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 CSN2P05814 226 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 LMO1P25800 156 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 DUSP1P28562 367 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 GRNP28799 593 aaKnown RBP12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 UQCRFS1P47985 274 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 KCNJ3P48549 501 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 TSPAN5P62079 268 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 CDSNQ15517 529 aa12.72□□□□□ -0.37
TRAPPC9-205ENST00000518839 PAN3Q58A45 887 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms