RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SGTBQ96EQ0 304 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 OR4F4Q96R69 305 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 OR52B2Q96RD2 323 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 ZNF251Q9BRH9 671 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 TCEAL7Q9BRU2 100 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 TMEM109Q9BVC6 243 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 TMED9Q9BVK6 235 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 ROPN1BQ9BZX4 212 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-207ENST00000518716 ZNF702PQ9H963 129 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 ROPN1Q9HAT0 212 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-207ENST00000518716 CHMP1AQ9HD42 196 aaPredicted RBP4.85□□□□□ -1.63
PABPC1-207ENST00000518716 USE1Q9NZ43 259 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 RNF7Q9UBF6 113 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 DNAJB11Q9UBS4 358 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 GLS2Q9UI32 602 aa4.85□□□□□ -1.63
PABPC1-207ENST00000518716 TRAV38-1A0A0B4J264 116 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 TEX13CA0A0J9YWL9 993 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 A0A1B0GW55 424 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 SMIM30A4D0T7 59 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 ANKRD61A6NGH8 418 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 H3BUX3 64 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 CTDSP2O14595 271 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 RER1O15258 196 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 SLC31A2O15432 143 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 GYPAP02724 150 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 FCER2P06734 321 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 DUX4L2P0CJ85 424 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 DUX4L3P0CJ86 424 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 DUX4L4P0CJ87 422 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 DUX4L5P0CJ88 424 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 DUX4L6P0CJ89 424 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 DUX4L7P0CJ90 424 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 SMIM6P0DI80 62 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 IRF2P14316 349 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 NQO2P16083 231 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 CTLA4P16410 223 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 ZNF26P17031 533 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 PPIBP23284 216 aaKnown RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 UCP1P25874 307 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 RCVRNP35243 200 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 OMPP47874 163 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 RASSF2P50749 326 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 GZMMP51124 257 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 RAB9AP51151 201 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 RAB13P51153 203 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 LSM6P62312 80 aaKnown RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 ELF3P78545 371 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 AQP6Q13520 282 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 KRR1Q13601 381 aaKnown RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 GK2Q14410 553 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 KPNB1Q14974 876 aaKnown RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 GUK1Q16774 197 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 NSUN5P1Q3KNT7 163 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 KLHL22Q53GT1 634 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 ALG10Q5BKT4 473 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 DUX4L9Q6RFH8 374 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 CFAP77Q6ZQR2 320 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 C11orf53Q8IXP5 236 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 MREGQ8N565 214 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 NECAP1Q8NC96 275 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 CSNK2A3Q8NEV1 391 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 OR5T2Q8NGG2 359 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 OR5L1Q8NGL2 311 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 OR4C13Q8NGP0 309 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 OR11L1Q8NGX0 322 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 OR2T6Q8NHC8 308 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 TMEM255BQ8WV15 326 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 MAFIPQ8WZ33 124 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 TAMM41Q96BW9 452 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 SAT2Q96F10 170 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 TEAD3Q99594 435 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 PRRT1Q99946 306 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 CPPED1Q9BRF8 314 aaPredicted RBP4.84□□□□□ -1.63
PABPC1-207ENST00000518716 TRIM36Q9NQ86 728 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 PTTG3PQ9NZH4 202 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 DUX4Q9UBX2 424 aa4.84□□□□□ -1.63
PABPC1-207ENST00000518716 TRAV25A0A0B4J276 109 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 UBE2QL1A1L167 161 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 MEIOCA2RUB1 952 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 DPPA5A6NC42 116 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 METTL15A6NJ78 407 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 OR2AT4A6NND4 320 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 UBDO15205 165 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 MT-ND2P03891 347 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 S100A8P05109 93 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 NHLRC4P0CG21 123 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-207ENST00000518716 GYPEP15421 78 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ANOS1P23352 680 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 G0S2P27469 103 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 RPL4P36578 427 aaKnown RBP4.83□□□□□ -1.64
PABPC1-207ENST00000518716 CTXN1P60606 82 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ACTBP60709 375 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 CXCR4P61073 352 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 RAP1BP61224 184 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 RAB11AP62491 216 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ACTA2P62736 377 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 RAP1AP62834 184 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ACTG2P63267 376 aa4.83□□□□□ -1.64
PABPC1-207ENST00000518716 ACTC1P68032 377 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms