RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 IGKV3-15P01624 115 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 IGLV1-44P01699 117 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 LCKP06239 509 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 MMP7P09237 267 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 OR4A8P0C604 315 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 GSTT2P0CG29 244 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 GSTT2BP0CG30 244 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 UBCP0CG48 685 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 PPIAL4FP0DN26 164 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 EGR2P11161 476 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 ZNF14P17017 642 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 SPI1P17947 270 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 STOMP27105 288 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 LOXP28300 417 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 CALCRP30988 508 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 POLR2IP36954 125 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 CBX5P45973 191 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 HTR5AP47898 357 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 FHITP49789 147 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ZNF133P52736 654 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 SLC25A1P53007 311 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 TPTEP56180 551 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PLP1P60201 277 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 LSM6P62312 80 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 ELF3P78545 371 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 CDK5Q00535 292 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PSG4Q00888 419 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 SCRN3Q0VDG4 424 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 AQP6Q13520 282 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ENDOGQ14249 297 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 SPHARQ15513 63 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 SLX4IPQ5VYV7 408 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 KDM4DQ6B0I6 523 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ARL9Q6T311 187 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 DCDC5Q6ZRR9 648 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 MRPL21Q7Z2W9 205 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 BCDIN3DQ7Z5W3 292 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 MYPOPQ86VE0 399 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 LDLRAD3Q86YD5 345 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ERI1Q8IV48 349 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 BOD1L2Q8IYS8 172 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 TCEANCQ8N8B7 351 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 SCCPDHQ8NBX0 429 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 OR4F15Q8NGB8 312 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 OR4D5Q8NGN0 318 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PIGTQ969N2 578 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PINX1Q96BK5 328 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 ZMYND19Q96E35 227 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 IL4I1Q96RQ9 567 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PITX2Q99697 317 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 C7orf50Q9BRJ6 194 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 TMEM204Q9BSN7 226 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 THAP7Q9BT49 309 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 ALG8Q9BVK2 526 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 HCAR1Q9BXC0 346 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 OR2H1Q9GZK4 316 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 NPFFR1Q9GZQ6 430 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 GABARAPL1Q9H0R8 117 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 C1orf198Q9H425 327 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 NOX3Q9HBY0 568 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 CMC2Q9NRP2 79 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 IMPAD1Q9NX62 359 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PLEK2Q9NYT0 353 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ZNF224Q9NZL3 707 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 RCC2Q9P258 522 aaKnown RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 MIOXQ9UGB7 285 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ENOPH1Q9UHY7 261 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ST6GALNAC2Q9UJ37 374 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 NAGKQ9UJ70 344 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 PPIAL4AQ9Y536 164 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 FKBP7Q9Y680 259 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 NCOA6Q14686 2063 aaPredicted RBP2.33□□□□□ -2.04
SKP1-204ENST00000517691 TEX15Q9BXT5 2789 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 APCP25054 2843 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 DOCK7Q96N67 2140 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ABCA12Q86UK0 2595 aa2.33□□□□□ -2.04
SKP1-204ENST00000517691 ITPR2Q14571 2701 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ANKHD1Q8IWZ3 2542 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 TRBV5-7A0A0A0MS05 114 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 F5H5K5 113 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 HSPB6O14558 160 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 PRKYO43930 277 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ADAP1O75689 374 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 GPX5O75715 221 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 NDUFA7O95182 113 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ALPLP05186 524 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 SOD3P08294 240 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 MRPL3P09001 348 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 EPHA2P29317 976 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CEACAM3P40198 252 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 RPS27P42677 84 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 KCNJ3P48549 501 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ART1P52961 327 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 CDC42P60953 191 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 EWSR1Q01844 656 aaKnown RBP eCLIP2.32□□□□□ -2.04
SKP1-204ENST00000517691 APOFQ13790 326 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 EIF2B1Q14232 305 aaKnown RBP2.32□□□□□ -2.04
SKP1-204ENST00000517691 RAB35Q15286 201 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 DEFB113Q30KQ7 82 aa2.32□□□□□ -2.04
SKP1-204ENST00000517691 ELFN2Q5R3F8 820 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms