RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 TREX1Q9NSU2 369 aa2.3□□□□□ -2.04
CALCOCO2-223ENST00000514267 ANAPC11Q9NYG5 84 aa2.3□□□□□ -2.04
CALCOCO2-223ENST00000514267 TAS2R1Q9NYW7 299 aa2.3□□□□□ -2.04
CALCOCO2-223ENST00000514267 MTFP1Q9UDX5 166 aa2.3□□□□□ -2.04
CALCOCO2-223ENST00000514267 RPL26L1Q9UNX3 145 aaKnown RBP2.3□□□□□ -2.04
CALCOCO2-223ENST00000514267 CACNG2Q9Y698 323 aa2.3□□□□□ -2.04
CALCOCO2-223ENST00000514267 RAI1Q7Z5J4 1906 aaPredicted RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 PDCD11Q14690 1871 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 ZNF236Q9UL36 1845 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 A0A0B4J2E0 115 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 A6NDX4 124 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 E5RI56 91 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 INS-IGF2F8WCM5 200 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 CCL22O00626 93 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 PRMT5O14744 637 aaPredicted RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 UBDO15205 165 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 ZNF861PO60384 105 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 SLC16A7O60669 478 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 RAD1O60671 282 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 NDUFS6O75380 124 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 RDH16O75452 317 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 PIRTP0C851 137 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 ZNF19P17023 458 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 GABRG2P18507 467 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 ME2P23368 584 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 KCNJ3P48549 501 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 CSNK1A1P48729 337 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 TUFMP49411 452 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 LHX2P50458 406 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 RAP1GDS1P52306 607 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 ZNF136P52737 540 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 C1QTNF8P60827 252 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 RPS23P62266 143 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 CTAG1AP78358 180 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 MRPS15P82914 257 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 NDPQ00604 133 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 SIGLEC14Q08ET2 396 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 STX5Q13190 355 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 ERCC8Q13216 396 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 FLOT2Q14254 428 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 IRF4Q15306 451 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 PSG3Q16557 428 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 DEFB115Q30KQ5 88 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 ORMDL2Q53FV1 153 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 ACSBG2Q5FVE4 666 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 CLLU1OSQ5K130 101 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 AVPI1Q5T686 147 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 METTL21CQ5VZV1 264 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 FAM45BPQ6NSW5 357 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 IZUMO2Q6UXV1 221 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 GLT6D1Q7Z4J2 308 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 DEFB128Q7Z7B8 93 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 PCP2Q8IVA1 136 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 UMODL1-AS1Q8N2C9 162 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 SYS1Q8N2H4 156 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 COX18Q8N8Q8 333 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 Q8N9W7 124 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 OR11H7Q8NGC8 314 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 OR4D6Q8NGJ1 314 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 FAM45AQ8TCE6 357 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 SPPL2BQ8TCT7 592 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 C2orf15Q8WU43 125 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 PYDC1Q8WXC3 89 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 FAM104AQ969W3 186 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 IMP4Q96G21 291 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 CENPNQ96H22 339 aaPredicted RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 OR52B2Q96RD2 323 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 GPR22Q99680 433 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 UQCC2Q9BRT2 126 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 CHAC1Q9BUX1 264 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 CHID1Q9BWS9 393 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 YIPF3Q9GZM5 350 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 C20orf27Q9GZN8 174 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 TOLLIPQ9H0E2 274 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 Q9H521 79 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 MRPL40Q9NQ50 206 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 FBXO5Q9UKT4 447 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 RBMX2Q9Y388 322 aaKnown RBP2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 LRRC42Q9Y546 428 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 OR51B2Q9Y5P1 312 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 SHROOM3Q8TF72 1996 aa2.29□□□□□ -2.04
CALCOCO2-223ENST00000514267 MN1Q10571 1320 aaPredicted RBP2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 IGLV1-50A0A075B6I6 118 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 A0A0A6YYD5 115 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 IGHV5-51A0A0C4DH38 117 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 ANKRD20A5PA0PJZ0 165 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 PINLYPA6NC86 204 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 CCDC160A6NGH7 325 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 A8MT66 165 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 H7C1H1 209 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 H7C2Y5 167 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 PSMD12O00232 456 aaPredicted RBP2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 AZIN1O14977 448 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 CD5LO43866 347 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 CTNSO60931 367 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 CA11O75493 328 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 RP2O75695 350 aa2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 CRTAPO75718 401 aaPredicted RBP2.28□□□□□ -2.04
CALCOCO2-223ENST00000514267 TRAPPC6AO75865 159 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms