RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PURGQ9UJV8 347 aaKnown RBP12.74□□□□□ -0.37
VCAN-211ENST00000513984 ITGB1BP2Q9UKP3 347 aa12.74□□□□□ -0.37
VCAN-211ENST00000513984 ATMQ13315 3056 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 PLSCR5A0PG75 271 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 FAM221AA4D161 298 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 TMEM210A6NLX4 147 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 PRRG2O14669 202 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 RHBDL1O75783 438 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 VAMP1P23763 118 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 UCNP55089 124 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 IKZF1Q13422 519 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 DHRS11Q6UWP2 260 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 Q8IYB0 196 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 SCCPDHQ8NBX0 429 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 OR8G5Q8NG78 346 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 S100PBPQ96BU1 408 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 ZNF488Q96MN9 340 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 ZNF2Q9BSG1 426 aaPredicted RBP12.73□□□□□ -0.37
VCAN-211ENST00000513984 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 SPACA1Q9HBV2 294 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 POLDIP2Q9Y2S7 368 aa12.73□□□□□ -0.37
VCAN-211ENST00000513984 DSPP15924 2871 aaKnown RBP12.72□□□□□ -0.37
VCAN-211ENST00000513984 DBX1A6NMT0 343 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 SNAPC5O75971 98 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 SFT2D2O95562 160 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 NAPSAO96009 420 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 NAAAQ02083 359 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 ZNF154Q13106 437 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 BAMBIQ13145 260 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 OR8G1Q15617 311 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 IGFBP7Q16270 282 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 C1QTNF12Q5T7M4 302 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 MBNL2Q5VZF2 373 aaKnown RBP12.72□□□□□ -0.37
VCAN-211ENST00000513984 SLC22A25Q6T423 547 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 DOLPP1Q86YN1 238 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 GTF3AQ92664 365 aaKnown RBP12.72□□□□□ -0.37
VCAN-211ENST00000513984 DHRS9Q9BPW9 319 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 TMEM100Q9NV29 134 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 ZNF835Q9Y2P0 537 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 CD8AP01732 235 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 GLAP06280 429 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 ERVK11-1P61568 191 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
VCAN-211ENST00000513984 NDUFA5Q16718 116 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 ZNF718Q3SXZ3 478 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 LIN54Q6MZP7 749 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 CASTOR1Q8WTX7 329 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 LIME1Q9H400 295 aa12.72□□□□□ -0.37
VCAN-211ENST00000513984 CHD3Q12873 2000 aaKnown RBP12.71□□□□□ -0.37
VCAN-211ENST00000513984 A0A0B4J2A0 478 aa12.71□□□□□ -0.38
VCAN-211ENST00000513984 A8MXE2 369 aa12.71□□□□□ -0.38
VCAN-211ENST00000513984 MCRIP1C9JLW8 97 aa12.71□□□□□ -0.38
VCAN-211ENST00000513984 MLNRO43193 412 aa12.71□□□□□ -0.38
VCAN-211ENST00000513984 PGA5P0DJD9 388 aa12.71□□□□□ -0.38
VCAN-211ENST00000513984 RPS2P15880 293 aaKnown RBP12.71□□□□□ -0.38
VCAN-211ENST00000513984 PI3P19957 117 aa12.71□□□□□ -0.38
VCAN-211ENST00000513984 MAP1BP46821 2468 aaKnown RBP12.71□□□□□ -0.38
VCAN-211ENST00000513984 SHPKQ9UHJ6 478 aa12.71□□□□□ -0.38
VCAN-211ENST00000513984 C14orf166Q9Y224 244 aaKnown RBP12.71□□□□□ -0.38
VCAN-211ENST00000513984 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.7□□□□□ -0.38
VCAN-211ENST00000513984 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 HMSDA8MTL9 139 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 H0YL77 283 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 CTSDP07339 412 aaPredicted RBP12.7□□□□□ -0.38
VCAN-211ENST00000513984 ACAA1P09110 424 aaPredicted RBP12.7□□□□□ -0.38
VCAN-211ENST00000513984 PGAM2P15259 253 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 GLRA1P23415 457 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 DUSP1P28562 367 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 ZNF81P51508 661 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 CLEC18BQ6UXF7 455 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 GFRALQ6UXV0 394 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 SUMF2Q8NBJ7 301 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 SNRNP40Q96DI7 357 aaKnown RBP12.7□□□□□ -0.38
VCAN-211ENST00000513984 NRIP2Q9BQI9 281 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 WDR13Q9H1Z4 485 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 HEXA-AS1Q9H8Q6 139 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
VCAN-211ENST00000513984 Q9N2K0 584 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 SLC23A1Q9UHI7 598 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
VCAN-211ENST00000513984 RP1L1Q8IWN7 2480 aaPredicted RBP12.7□□□□□ -0.38
VCAN-211ENST00000513984 CADP27708 2225 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 TRBV6-6A0A0A6YYG2 114 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 TRAV24A0A0B4J272 114 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 TIMM8AO60220 97 aaPredicted RBP12.69□□□□□ -0.38
VCAN-211ENST00000513984 FAM87AP0C7U9 286 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 GCH1P30793 250 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 ZNF83P51522 516 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 Q6P435 159 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 MRGPRGQ86SM5 289 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 MUCL1Q96DR8 90 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 FXYD6Q9H0Q3 95 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 CLEC4MQ9H2X3 399 aaPredicted RBP12.69□□□□□ -0.38
VCAN-211ENST00000513984 RIMS4Q9H426 269 aaPredicted RBP12.69□□□□□ -0.38
VCAN-211ENST00000513984 A0A0G2JNJ9 132 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 RFPL4AA6NLU0 287 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 RFPL4AL1F8VTS6 287 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 CCSO14618 274 aa12.69□□□□□ -0.38
VCAN-211ENST00000513984 CDIPTO14735 213 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms