RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 NIPAL2Q9H841 368 aa8.84□□□□□ -0.99
SFXN1-210ENST00000513725 PPCSQ9HAB8 311 aa8.84□□□□□ -0.99
SFXN1-210ENST00000513725 RANGRFQ9HD47 186 aaPredicted RBP8.84□□□□□ -0.99
SFXN1-210ENST00000513725 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
SFXN1-210ENST00000513725 PNPOQ9NVS9 261 aa8.84□□□□□ -0.99
SFXN1-210ENST00000513725 DNAJC27Q9NZQ0 273 aa8.84□□□□□ -0.99
SFXN1-210ENST00000513725 HAO1Q9UJM8 370 aa8.84□□□□□ -0.99
SFXN1-210ENST00000513725 IGHV3-72A0A0B4J1Y9 119 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 J3QR06 171 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 MGST3O14880 152 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 MOSP00540 346 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 NFYBP25208 207 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 PTGFRP43088 359 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 TRAM2Q15035 370 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 SERTAD4-AS1Q5TG53 156 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 LCN1P1Q5VSP4 162 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 PLCXD3Q63HM9 321 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 MBOAT2Q6ZWT7 520 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 RRM2BQ7LG56 351 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 MINDY2Q8NBR6 621 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 SYT8Q8NBV8 401 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 OR52N4Q8NGI2 321 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 TSPEARQ8WU66 669 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 CORO2AQ92828 525 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 ERMAPQ96PL5 475 aaPredicted RBP8.83□□□□□ -1
SFXN1-210ENST00000513725 DGCR6LQ9BY27 220 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 PARP11Q9NR21 331 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 TMEM5Q9Y2B1 443 aa8.83□□□□□ -1
SFXN1-210ENST00000513725 FLG2Q5D862 2391 aaPredicted RBP8.83□□□□□ -1
SFXN1-210ENST00000513725 IGHV1-3A0A0C4DH29 117 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 TVP23AA6NH52 213 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 TRPC5OSA6NMA1 111 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 ATP6V0E1O15342 81 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 CSN3P07498 182 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 SLC6A6P31641 620 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 CRYBA2P53672 197 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 ERVK11-1P61568 191 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
SFXN1-210ENST00000513725 DEFB135Q30KP9 77 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 KRT74Q7RTS7 529 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 POM121L12Q8N7R1 296 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 OR4K13Q8NH42 304 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 FNDC11Q9BVV2 318 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 THAP1Q9NVV9 213 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 RHCGQ9UBD6 479 aa8.82□□□□□ -1
SFXN1-210ENST00000513725 FAT1Q14517 4588 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 A0A087WUU8 490 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 A0A1W2PN81 502 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 FUOMA2VDF0 154 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 HSD17B6O14756 317 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 IGHA1P01876 353 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 SHBGP04278 402 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 GAPDHP04406 335 aaKnown RBP8.81□□□□□ -1
SFXN1-210ENST00000513725 PSKH1P11801 424 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 HIST1H1CP16403 213 aaKnown RBP8.81□□□□□ -1
SFXN1-210ENST00000513725 CHRNA7P36544 502 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 MAP2K3P46734 347 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 ZNF816Q0VGE8 651 aaPredicted RBP8.81□□□□□ -1
SFXN1-210ENST00000513725 TATDN3Q17R31 274 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 PAGE3Q5JUK9 113 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 UTF1Q5T230 341 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 TBPL2Q6SJ96 375 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 OR10X1Q8NGY0 326 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 EPS8L3Q8TE67 593 aaKnown RBP8.81□□□□□ -1
SFXN1-210ENST00000513725 CASTOR1Q8WTX7 329 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 PKNOX2Q96KN3 472 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 ZCCHC4Q9H5U6 513 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 KRT84Q9NSB2 600 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 ERGIC3Q9Y282 383 aa8.81□□□□□ -1
SFXN1-210ENST00000513725 ZNF785A8K8V0 405 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 UBDO15205 165 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 SLC2A2P11168 524 aaPredicted RBP8.8□□□□□ -1
SFXN1-210ENST00000513725 MECP2P51608 486 aaKnown RBP8.8□□□□□ -1
SFXN1-210ENST00000513725 APOC4P55056 127 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 F2RL1P55085 397 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 SYNJ2BPP57105 145 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 LINC00205P59089 165 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 GUCA2BQ16661 112 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 CD300EQ496F6 205 aaPredicted RBP8.8□□□□□ -1
SFXN1-210ENST00000513725 SLC16A13Q7RTY0 426 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 OFCC1Q8IZS5 231 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 FAM86B1Q8N7N1 296 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 PROKR2Q8NFJ6 384 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 RHOVQ96L33 236 aa8.8□□□□□ -1
SFXN1-210ENST00000513725 FOXA2Q9Y261 457 aaPredicted RBP8.8□□□□□ -1
SFXN1-210ENST00000513725 DHRS12A0PJE2 317 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 ZNF593O00488 134 aaPredicted RBP8.79□□□□□ -1
SFXN1-210ENST00000513725 HAND1O96004 215 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 IGHV3-7P01780 117 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 CTRB1P17538 263 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 CD1BP29016 333 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 PYCR1P32322 319 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 REG1BP48304 166 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 CKAP4Q07065 602 aaKnown RBP8.79□□□□□ -1
SFXN1-210ENST00000513725 ZNF684Q5T5D7 378 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 CTRB2Q6GPI1 263 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 PYHIN1Q6K0P9 492 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 RNF148Q8N7C7 305 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 RCN3Q96D15 328 aa8.79□□□□□ -1
SFXN1-210ENST00000513725 SPDL1Q96EA4 605 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms