RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 RNF213Q63HN8 5207 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 IGHV1-3A0A0C4DH29 117 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 UBE2CO00762 179 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 SDHDO14521 159 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 HSD17B6O14756 317 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 ITM2AO43736 263 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 MOSP00540 346 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 TNFRSF1BP20333 461 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 PTMSP20962 102 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 HAAOP46952 286 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 CRYBA2P53672 197 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 APOC4P55056 127 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 SYNJ2BPP57105 145 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 GRB2P62993 217 aaKnown RBP6.92□□□□□ -1.3
CLCN3-208ENST00000512813 ST3GAL3Q11203 375 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 PVRIGQ6DKI7 326 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 Q6ZRM9 215 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 MOB3BQ86TA1 216 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 OR52N4Q8NGI2 321 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 OR4D6Q8NGJ1 314 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 OR9I1Q8NGQ6 314 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 UBALD1Q8TB05 177 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 HAVCR2Q8TDQ0 301 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 SLC26A7Q8TE54 656 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 RASSF5Q8WWW0 418 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 CORO2AQ92828 525 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 RCN3Q96D15 328 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 APOPT1Q96IL0 206 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 RHOVQ96L33 236 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 CHST6Q9GZX3 395 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 RPRD1BQ9NQG5 326 aaKnown RBP6.92□□□□□ -1.3
CLCN3-208ENST00000512813 CENPMQ9NSP4 180 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 THAP1Q9NVV9 213 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 VAPAQ9P0L0 249 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 RAP2CQ9Y3L5 183 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 IER3IP1Q9Y5U9 82 aa6.92□□□□□ -1.3
CLCN3-208ENST00000512813 A0A1W2PN81 502 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 MGST3O14880 152 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 ZSCAN12O43309 604 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 RENP00797 406 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 IGHA1P01876 353 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 MPZP25189 248 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 SLC6A6P31641 620 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 CHRNA7P36544 502 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 PTGFRP43088 359 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 SLC15A1P46059 708 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 RPL14P50914 215 aaKnown RBP6.91□□□□□ -1.3
CLCN3-208ENST00000512813 RPS6KA3P51812 740 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 F2RL1P55085 397 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 ZNF121P58317 390 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-208ENST00000512813 SLC16A13Q7RTY0 426 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 HDXQ7Z353 690 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 STPG3Q8N7X2 389 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 TMEM104Q8NE00 496 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 SPACA5Q96QH8 159 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 MBOAT4Q96T53 435 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 NMNAT3Q96T66 252 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 ZCCHC4Q9H5U6 513 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 ZC4H2Q9NQZ6 224 aa6.91□□□□□ -1.3
CLCN3-208ENST00000512813 SDR39U1Q9NRG7 319 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-208ENST00000512813 FOXA2Q9Y261 457 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-208ENST00000512813 IGLV2-18A0A075B6J9 118 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-208ENST00000512813 EVPLLA8MZ36 301 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 HLA-DRB1P01911 266 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 APOC1P02654 83 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 SLC2A2P11168 524 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-208ENST00000512813 GABRR1P24046 479 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 NFYBP25208 207 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 CD1BP29016 333 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 BLVRBP30043 206 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-208ENST00000512813 GNG11P61952 73 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 GUCA2BQ16661 112 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 LCN1P1Q5VSP4 162 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 SLX4IPQ5VYV7 408 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 PYHIN1Q6K0P9 492 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 DPY19L2P2Q6ZN68 376 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 TRMT10CQ7L0Y3 403 aaKnown RBP6.9□□□□□ -1.3
CLCN3-208ENST00000512813 ZNF573Q86YE8 665 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 RNF113BQ8IZP6 322 aaKnown RBP6.9□□□□□ -1.3
CLCN3-208ENST00000512813 KIRREL3Q8IZU9 778 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 RNF148Q8N7C7 305 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 TSPEARQ8WU66 669 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 LZICQ8WZA0 190 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 KIRREL1Q96J84 757 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 PRRC1Q96M27 445 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 NIPAL2Q9H841 368 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 GPR173Q9NS66 373 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 HAO1Q9UJM8 370 aa6.9□□□□□ -1.3
CLCN3-208ENST00000512813 IGHV7-81A0A0B4J1V7 117 aa6.89□□□□□ -1.31
CLCN3-208ENST00000512813 GAPDHP04406 335 aaKnown RBP6.89□□□□□ -1.31
CLCN3-208ENST00000512813 BPGMP07738 259 aa6.89□□□□□ -1.31
CLCN3-208ENST00000512813 HSD11B1P28845 292 aa6.89□□□□□ -1.31
CLCN3-208ENST00000512813 OR3A1P47881 315 aa6.89□□□□□ -1.31
CLCN3-208ENST00000512813 CRIP2P52943 208 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-208ENST00000512813 FXYD6P3P58550 94 aa6.89□□□□□ -1.31
CLCN3-208ENST00000512813 ECSCRQ19T08 205 aa6.89□□□□□ -1.31
CLCN3-208ENST00000512813 MOGAT2Q3SYC2 334 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms