RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ERP29P30040 261 aaKnown RBP12.38□□□□□ -0.43
TPM3-219ENST00000509409 DYNLT3P51808 116 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 P2RX3P56373 397 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 IL18R1Q13478 541 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 KPNB1Q14974 876 aaKnown RBP12.38□□□□□ -0.43
TPM3-219ENST00000509409 ZIK1Q3SY52 487 aaPredicted RBP12.38□□□□□ -0.43
TPM3-219ENST00000509409 SPIN3Q5JUX0 258 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 CAPSLQ8WWF8 208 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 PYDC1Q8WXC3 89 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 SPSB1Q96BD6 273 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 MRPL48Q96GC5 212 aaKnown RBP12.38□□□□□ -0.43
TPM3-219ENST00000509409 SPACA5Q96QH8 159 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 MMP28Q9H239 520 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 HMG20AQ9NP66 347 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 ING3Q9NXR8 418 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 HHLA2Q9UM44 414 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 UBE2J1Q9Y385 318 aaPredicted RBP12.38□□□□□ -0.43
TPM3-219ENST00000509409 SNTNA6NMZ2 147 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 SLC16A6O15403 523 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 XPNPEP2O43895 674 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 MMP23AO75900 390 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 OR2H2O95918 312 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 ISG15P05161 165 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 ZNF44P15621 663 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 OR3A1P47881 315 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 NANOS3P60323 173 aaKnown RBP12.37□□□□□ -0.43
TPM3-219ENST00000509409 SAMD5Q5TGI4 173 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 PRAMEF5Q5TYX0 476 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 MEDAGQ5VYS4 303 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 OR52W1Q6IF63 320 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 Q6ZS46 218 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 NDUFA11Q86Y39 141 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 ACBD7Q8N6N7 88 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 OR4F17Q8NGA8 305 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 RNF166Q96A37 237 aaPredicted RBP12.37□□□□□ -0.43
TPM3-219ENST00000509409 OR4F4Q96R69 305 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 MBOAT4Q96T53 435 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 CITED2Q99967 270 aaPredicted RBP12.37□□□□□ -0.43
TPM3-219ENST00000509409 GAL3ST2Q9H3Q3 398 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
TPM3-219ENST00000509409 CDK2P24941 298 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 BRS3P32247 399 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 CCR9P51686 369 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 SNRPGP62308 76 aaKnown RBP12.36□□□□□ -0.43
TPM3-219ENST00000509409 AESQ08117 197 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 ALKBH1Q13686 389 aaKnown RBP12.36□□□□□ -0.43
TPM3-219ENST00000509409 FDX2Q6P4F2 183 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 RTN4RL2Q86UN3 420 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 OR51A4Q8NGJ6 313 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 OR5D18Q8NGL1 313 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 OR13C9Q8NGT0 318 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 OR10AC1Q8NH08 325 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 ZNF596Q8TC21 504 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 C4orf36Q96KX1 117 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 MYCBPQ99417 103 aaPredicted RBP12.36□□□□□ -0.43
TPM3-219ENST00000509409 ZCCHC4Q9H5U6 513 aa12.36□□□□□ -0.43
TPM3-219ENST00000509409 IGKV1-12A0A0C4DH73 117 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 A0A1W2PRX2 142 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 FAM172BPA6NC97 362 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 FAM90A22PA8MWA6 464 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 J3QRE1 110 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 TOR1AO14656 332 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 DEGS1O15121 323 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 KDM4BO94953 1096 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 IGKV1D-12P01611 117 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 HCKP08631 526 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 TMEM225BP0DP42 221 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 CD24P25063 80 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 GLIPR1P48060 266 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 ARHGDIBP52566 201 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 OXLD1Q5BKU9 147 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 SLC25A30Q5SVS4 291 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 BAIAP2L2Q6UXY1 529 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 RNF144BQ7Z419 303 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 CENPVQ7Z7K6 275 aaPredicted RBP12.35□□□□□ -0.43
TPM3-219ENST00000509409 LHFPL3Q86UP9 236 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 OR5AU1Q8NGC0 362 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 OR4D6Q8NGJ1 314 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 OR4P4Q8NGL7 312 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 SGCDQ92629 289 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 PELI1Q96FA3 418 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 AKR1E2Q96JD6 320 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 HRASLS5Q96KN8 279 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 WNT10AQ9GZT5 417 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 TAS2R3Q9NYW6 316 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 AASSQ9UDR5 926 aa12.35□□□□□ -0.43
TPM3-219ENST00000509409 EXOGQ9Y2C4 368 aaKnown RBP12.35□□□□□ -0.43
TPM3-219ENST00000509409 LEUTXA8MZ59 168 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 EI24O14681 340 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 MT-ND2P03891 347 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 ALPLP05186 524 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 PRRX1P54821 245 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 BDH1Q02338 343 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 FBLN7Q53RD9 439 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 KRBOX4Q5JUW0 171 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 HEPN1Q6WQI6 88 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 OR5D14Q8NGL3 314 aa12.34□□□□□ -0.43
TPM3-219ENST00000509409 CORO2AQ92828 525 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms