RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 Q8N7P7 452 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 TMEM158Q8WZ71 300 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 FCGR1BQ92637 280 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 UFD1Q92890 307 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 TNFRSF14Q92956 283 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 OR14A2Q96R54 314 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 TBX15Q96SF7 602 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 ZMAT3Q9HA38 289 aaKnown RBP8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 NOX4Q9NPH5 578 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 ACOT13Q9NPJ3 140 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 RBFOX1Q9NWB1 397 aaKnown RBP8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 TAS2R4Q9NYW5 299 aa8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 SF3B6Q9Y3B4 125 aaKnown RBP8.72□□□□□ -1.01
POLR2J3-213ENST00000508848 STAB1Q9NY15 2570 aa8.71□□□□□ -1.01
POLR2J3-213ENST00000508848 TRAV8-7A0A075B6U6 113 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 A0A0G2JK05 382 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 CENPVL3A0A0U1RRI6 287 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 A0A1B0GW55 424 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 C17orf98A8MV24 154 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 GABRPO00591 440 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 SPRY1O43609 319 aaPredicted RBP8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 ARL6IP5O75915 188 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 GLAP06280 429 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 UBBP0CG47 229 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DUX4L2P0CJ85 424 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DUX4L3P0CJ86 424 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DUX4L4P0CJ87 422 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DUX4L5P0CJ88 424 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DUX4L6P0CJ89 424 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DUX4L7P0CJ90 424 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 PRKACAP17612 351 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 SRMP19623 302 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 GABRA5P31644 462 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 POU3F4P49335 361 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 UBE2E1P51965 193 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 CAPZA1P52907 286 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 ARF6P62330 175 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 MPV17LQ2QL34 196 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 KCTD21Q4G0X4 260 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 C1orf100Q5SVJ3 147 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DDI2Q5TDH0 399 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 UBE2UQ5VVX9 321 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 Q6P435 159 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DUX4L9Q6RFH8 374 aaPredicted RBP8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 IL17RELQ6ZVW7 336 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 GDPD3Q7L5L3 318 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 ZNF367Q7RTV3 350 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 ZFP41Q8N8Y5 198 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 TMEM185AQ8NFB2 350 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 SGCDQ92629 289 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 SPACA5Q96QH8 159 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 GPER1Q99527 375 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 METTL9Q9H1A3 318 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 HEXA-AS1Q9H8Q6 139 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 LINC00574Q9H8X3 128 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 EXOSC4Q9NPD3 245 aaKnown RBP8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 DUX4Q9UBX2 424 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 ZNF69Q9UC07 566 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 LINC00312Q9Y6C7 94 aa8.71□□□□□ -1.02
POLR2J3-213ENST00000508848 IGHV1-69DA0A0B4J2H0 117 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 hADV38S2A0JD32 116 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 ANGPTL7O43827 346 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 IGHV1-69P01742 117 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 GTF2F2P13984 249 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 SELLP14151 372 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 EEF1B2P24534 225 aaKnown RBP8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 GP2P55259 537 aaKnown RBP8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 GMFBP60983 142 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 RSU1Q15404 277 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 MIDNQ504T8 468 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 TMEM91Q6ZNR0 172 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 RNF144BQ7Z419 303 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 SATL1Q86VE3 508 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 SPARTQ8N0X7 666 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 BPIFB2Q8N4F0 458 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 TMEM86BQ8N661 226 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 OR13C5Q8NGS8 318 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 FAM216AQ8WUB2 273 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 TNFAIP8L1Q8WVP5 186 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 H1FXQ92522 213 aaKnown RBP8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 S100A13Q99584 98 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 CCDC90BQ9GZT6 254 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 MS4A7Q9GZW8 240 aaPredicted RBP8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 SPACA1Q9HBV2 294 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 TAS2R3Q9NYW6 316 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 OR14J1Q9UGF5 321 aa8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 UBE2J1Q9Y385 318 aaPredicted RBP8.7□□□□□ -1.02
POLR2J3-213ENST00000508848 TRAV1-2A0A0B4J238 106 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 TMEM82A0PJX8 343 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 DEGS1O15121 323 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 PSPNO60542 156 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 OR2H2O95918 312 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 CSTBP04080 98 aaKnown RBP8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 ZNF728P0DKX0 622 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 IGHV4-38-2P0DP08 117 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 CFPP27918 469 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 FGF9P31371 208 aaPredicted RBP8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 OR3A1P47881 315 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 DLX6P56179 175 aa8.69□□□□□ -1.02
POLR2J3-213ENST00000508848 RPL15P61313 204 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms