RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 DOK5Q9P104 306 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SEMA5BQ9P283 1151 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 MCTS1Q9ULC4 181 aaKnown RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 CYP8B1Q9UNU6 501 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SLC7A11Q9UPY5 501 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 UBE2J1Q9Y385 318 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 WSB1Q9Y6I7 421 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ARHGEF17Q96PE2 2063 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 IGLV3-12A0A075B6K2 115 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CCDC187A0A096LP49 1063 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 TRBV11-1A0A0K0K1C0 115 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 KIR2DS1A0A191URI9 304 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 C3orf85A0A1B0GTC6 90 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A1W2PP11 408 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 SMCO3A2RU48 225 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CLEC18AA5D8T8 446 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5H15A6NDH6 313 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 ARGFXA6NJG6 315 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5H1A6NKK0 313 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 GJE1A6NN92 205 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CDRT15L2A8MXV6 281 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NPIPA2E9PIF3 369 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 F5H5K5 113 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NPIPA3F8WFD2 350 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 H3BMH7 237 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CLDN34H7C241 214 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 MASP2O00187 686 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 HSD17B6O14756 317 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 BCAT2O15382 392 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 MPPED1O15442 326 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 DHHO43323 396 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 XRCC2O43543 280 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 DNPH1O43598 174 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 PDCD6O75340 191 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 SCAF4O95104 1147 aaKnown RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 TK1P04183 234 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 SLC25A6P12236 298 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 DAOP14920 347 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 MYOGP15173 224 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 FOLR1P15328 257 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 PNLIPP16233 465 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAHP16930 419 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 TCN2P20062 427 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CD27P26842 260 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 ATP6V0CP27449 155 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 OTX1P32242 354 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CDAP32320 146 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 PPP1CCP36873 323 aaKnown RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 KIR2DS4P43632 304 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NOVA1P51513 510 aaKnown RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 FUT6P51993 359 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 EFNA3P52797 238 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CLDN17P56750 224 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 FXYD4P59646 89 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 PCBD1P61457 104 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 RPL23AP62750 156 aaKnown RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 DLK1P80370 383 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 MRPS34P82930 218 aaKnown RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NHLH2Q02577 135 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 KIR2DS1Q14954 304 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 RAB35Q15286 201 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 EXT1Q16394 746 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 Q3ZCU0 254 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NCMAPQ5T1S8 102 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CDPF1Q6NVV7 123 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 DBX2Q6ZNG2 339 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 Q6ZS49 121 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 SSX9Q7RTT3 188 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 REC114Q7Z4M0 266 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 LYZL2Q7Z4W2 148 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 SPRED2Q7Z698 418 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 ANKRD37Q7Z713 158 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF100Q8IYN0 542 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 PRSS58Q8IYP2 241 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CMTM1Q8IZ96 169 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 H1FOOQ8IZA3 346 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 MAML2Q8IZL2 1156 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 FBXL14Q8N1E6 418 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 OSR2Q8N2R0 312 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF383Q8NA42 475 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 CLEC18CQ8NCF0 446 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NFAM1Q8NET5 270 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR2M3Q8NG83 312 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5D18Q8NGL1 313 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR10D4PQ8NGN7 298 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5R1Q8NH85 324 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 SCGB1C1Q8TD33 95 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NPRL2Q8WTW4 380 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 PIGTQ969N2 578 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 SLAMF9Q96A28 289 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 MSI2Q96DH6 328 aaKnown RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 MRPL38Q96DV4 380 aaKnown RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM210BQ96KR6 192 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 LYZL4Q96KX0 146 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM56Q96MV1 263 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NOL4LQ96MY1 436 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 ATP5SQ99766 215 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 NUDT22Q9BRQ3 303 aa4.31□□□□□ -1.72
HMGB3P16-201ENST00000508037 BCL2L14Q9BZR8 327 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms