RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 OR2Y1Q8NGV0 311 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 OR5P2Q8WZ92 322 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 YIPF5Q969M3 257 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 BIRC8Q96P09 236 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 OR2V2Q96R30 315 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 ZNF586Q9NXT0 402 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 TAS2R1Q9NYW7 299 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 DNAJC27Q9NZQ0 273 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 TMEM131Q92545 1883 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 IGKV2-24A0A0C4DH68 120 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 LOC100506127A0A0U1RQW1 187 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 MYBPHLA2RUH7 354 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 GMNCA6NCL1 334 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 UPK2O00526 184 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 MYO1DO94832 1006 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 CST4P01036 141 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 CECR9P0C854 216 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 PRKCDQ05655 676 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 PSG3Q16557 428 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 KRTAP25-1Q3LHN0 102 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 Q3ZCU0 254 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 DEFB134Q4QY38 66 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 UBE2NLQ5JXB2 153 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 TMEM215Q68D42 235 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 ZNF470Q6ECI4 717 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 ERICH5Q6P6B1 374 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 AMN1Q8IY45 258 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 OR2M3Q8NG83 312 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 OR8A1Q8NGG7 326 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 YPEL4Q96NS1 127 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 LINC01587Q99440 93 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 TM2D3Q9BRN9 247 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 TSGA10Q9BZW7 698 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 DSN1Q9H410 356 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 MAT2BQ9NZL9 334 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 MRM2Q9UI43 246 aaKnown RBP1.62□□□□□ -2.15
LSM6-205ENST00000507449 SLC22A14Q9Y267 594 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 STK38LQ9Y2H1 464 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 ZNF780BQ9Y6R6 833 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 ICOSQ9Y6W8 199 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 PLXNB3Q9ULL4 1909 aa1.62□□□□□ -2.15
LSM6-205ENST00000507449 NOS1P29475 1434 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 ZNF729A6NN14 1252 aaPredicted RBP1.61□□□□□ -2.15
LSM6-205ENST00000507449 A8MWP4 228 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 H3BP45 60 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 C15orf65H3BRN8 121 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 BRI3O95415 125 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 IGKV1D-33P01593 117 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 IGKV1-33P01594 117 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 SOD3P08294 240 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 TPM1P09493 284 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 GIMD1P0DJR0 217 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 LGALS3P17931 250 aaKnown RBP1.61□□□□□ -2.15
LSM6-205ENST00000507449 TSPOP30536 169 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 MAGEA3P43357 314 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 NUDT2P50583 147 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 PLTPP55058 493 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 HADHBP55084 474 aaKnown RBP1.61□□□□□ -2.15
LSM6-205ENST00000507449 DSTNP60981 165 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 UBE2KP61086 200 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 BAXQ07812 192 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 TAF9Q16594 264 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 FBXO48Q5FWF7 155 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 DPPA2Q7Z7J5 298 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 TMEM25Q86YD3 366 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 TRIML2Q8N7C3 387 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 OR8G5Q8NG78 346 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 OR4K17Q8NGC6 315 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 OR6K3Q8NGY3 331 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 C2orf15Q8WU43 125 aaKnown RBP1.61□□□□□ -2.15
LSM6-205ENST00000507449 MAL2Q969L2 176 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 ZMYND19Q96E35 227 aaPredicted RBP1.61□□□□□ -2.15
LSM6-205ENST00000507449 C19orf60Q96EN9 201 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 TXNIPQ9H3M7 391 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 MFSD1Q9H3U5 465 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 TMBIM4Q9HC24 238 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 IFT46Q9NQC8 304 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 CARHSP1Q9Y2V2 147 aaKnown RBP1.61□□□□□ -2.15
LSM6-205ENST00000507449 SHROOM3Q8TF72 1996 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 NRCAMQ92823 1304 aa1.61□□□□□ -2.15
LSM6-205ENST00000507449 LTBP4Q8N2S1 1624 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 IGKV3D-11A0A0A0MRZ8 115 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 IGHV3-21A0A0B4J1V1 117 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 F5H5P2 479 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 PLPP3O14495 311 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 RGS5O15539 181 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 CPSF4O95639 269 aaKnown RBP1.6□□□□□ -2.15
LSM6-205ENST00000507449 CA2P00918 260 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 IGLV6-57P01721 117 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 PTHLHP12272 177 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 CNTFRP26992 372 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 IL12BP29460 328 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 GTF2H1P32780 548 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 KCNJ3P48549 501 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 TTPAP49638 278 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 AQP5P55064 265 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 FOXA1P55317 472 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 CCL23P55773 120 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 BNIP2Q12982 314 aa1.6□□□□□ -2.15
LSM6-205ENST00000507449 BIKQ13323 160 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms