RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 IGKV1D-12P01611 117 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 HTR1DP28221 377 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 ERP29P30040 261 aaKnown RBP9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 CDC42P60953 191 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 PDZK1IP1Q13113 114 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 IL18R1Q13478 541 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 SPIN3Q5JUX0 258 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 LHFPL2Q6ZUX7 228 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 UTS2BQ765I0 119 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 SGCDQ92629 289 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 PHF21AQ96BD5 680 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 SPSB1Q96BD6 273 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 OPALINQ96PE5 141 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 OSBPL10Q9BXB5 764 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 GAL3ST2Q9H3Q3 398 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 HMG20AQ9NP66 347 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 EXOSC4Q9NPD3 245 aaKnown RBP9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 NECAP2Q9NVZ3 263 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 FRRS1LQ9P0K9 344 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 GSTK1Q9Y2Q3 226 aa9.25□□□□□ -0.93
HMGCS1-204ENST00000507293 TRGV10A0A0A0MS01 117 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 ATP5HO75947 161 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 OR2H2O95918 312 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 ISG15P05161 165 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 OCM2P0CE71 109 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 OCMP0CE72 109 aaPredicted RBP9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 CDK2P24941 298 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 CD24P25063 80 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 GDNFP39905 211 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 RASSF2P50749 326 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 NANOS3P60323 173 aaKnown RBP9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 FDX2Q6P4F2 183 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 C16orf82Q7Z2V1 217 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 RNF144BQ7Z419 303 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 ABHD12Q8N2K0 398 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 OR5AU1Q8NGC0 362 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 OR5D18Q8NGL1 313 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 OR10AC1Q8NH08 325 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 RNFT2Q96EX2 444 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 CENPNQ96H22 339 aaPredicted RBP9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 SPACA5Q96QH8 159 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 MBOAT4Q96T53 435 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 OCSTAMPQ9BR26 566 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 AURKAIP1Q9NWT8 199 aaPredicted RBP9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 IMPAD1Q9NX62 359 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 DPM3Q9P2X0 92 aa9.24□□□□□ -0.93
HMGCS1-204ENST00000507293 DAPL1A0PJW8 107 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 H3BUI4 141 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 SH2D1BO14796 132 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 SLC16A6O15403 523 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 KDM4BO94953 1096 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 HTR1AP08908 422 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 ZNF44P15621 663 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 GLIPR1P48060 266 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 LOXL3P58215 753 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 CD83Q01151 205 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 BDH1Q02338 343 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 AESQ08117 197 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 OR52W1Q6IF63 320 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 HEPN1Q6WQI6 88 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 RTN4RL2Q86UN3 420 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 OR51A4Q8NGJ6 313 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 OR13C3Q8NGS6 347 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 OR13C9Q8NGT0 318 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 ZNF596Q8TC21 504 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 CAPSLQ8WWF8 208 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 AKR1E2Q96JD6 320 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 SLC25A33Q9BSK2 321 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 COMMD4Q9H0A8 199 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 LIN7BQ9HAP6 207 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 ZNF286AQ9HBT8 521 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 NEK6Q9HC98 313 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 ING3Q9NXR8 418 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 TAS2R3Q9NYW6 316 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 HHLA2Q9UM44 414 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 PCDHGB5Q9Y5G0 923 aa9.23□□□□□ -0.93
HMGCS1-204ENST00000507293 NOTCH3Q9UM47 2321 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 ODAMA1E959 279 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 FUOMA2VDF0 154 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 LEUTXA8MZ59 168 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 J3QLW9 94 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 J3QRE1 110 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 IGLV1-47P01700 117 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 LPLP06858 475 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 PF4V1P10720 104 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 IGLL1P15814 213 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 ZNF19P17023 458 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 CD33P20138 364 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 LMO1P25800 156 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 CD34P28906 385 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 BRS3P32247 399 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 PTGFRP43088 359 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 CCR9P51686 369 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 ARHGDIBP52566 201 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 SCN1BQ07699 218 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 ABCA11PQ4W5N1 156 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 TCTEX1D4Q5JR98 221 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 KRBOX4Q5JUW0 171 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 TPTE2P1Q5T6R2 138 aa9.22□□□□□ -0.93
HMGCS1-204ENST00000507293 FOXB2Q5VYV0 432 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 309.3 ms