RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DVL3Q92997 716 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-205ENST00000506880 MSI2Q96DH6 328 aaKnown RBP7.04□□□□□ -1.28
PDGFC-205ENST00000506880 YIPF6Q96EC8 236 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 GAFA1Q96PS6 74 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 DCTN5Q9BTE1 182 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 BARHL1Q9BZE3 327 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 CNTD2Q9H8S5 307 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 TAS2R3Q9NYW6 316 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 OR6C3Q9NZP0 311 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 NDUFA13Q9P0J0 144 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RABL2AQ9UBK7 228 aaPredicted RBP7.04□□□□□ -1.28
PDGFC-205ENST00000506880 STEAP1Q9UHE8 339 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RPUSD1Q9UJJ7 312 aaKnown RBP7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RAB22AQ9UL26 194 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 HSF4Q9ULV5 492 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 RABL2BQ9UNT1 228 aa7.04□□□□□ -1.28
PDGFC-205ENST00000506880 KIAA2026Q5HYC2 2103 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 A0A0A6YYJ9 748 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 hADV38S2A0JD32 116 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 METTL21EPA6NDL7 271 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 A6NIN4 97 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 KIAA1324LA8MWY0 1029 aaPredicted RBP7.03□□□□□ -1.28
PDGFC-205ENST00000506880 DVL1O14640 695 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 AIREO43918 545 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 GABARAPO95166 117 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 TGFAP01135 160 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 GYPAP02724 150 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 TK1P04183 234 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 MAS1P04201 325 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 SMIM18P0DKX4 95 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 ARSBP15848 533 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 PRKACAP17612 351 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 EGR1P18146 543 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 FUT3P21217 361 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 GUCA2AQ02747 115 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 RAB11BQ15907 218 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 CR1LQ2VPA4 569 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 AVPI1Q5T686 147 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 DCAF12L2Q5VW00 463 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 GDPD3Q7L5L3 318 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 GPR141Q7Z602 305 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 SATL1Q86VE3 508 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 FAM89BQ8N5H3 189 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF565Q8N9K5 539 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 OR13C5Q8NGS8 318 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 AP3S1Q92572 193 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 CORO2AQ92828 525 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 TMEM203Q969S6 136 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 SLAMF9Q96A28 289 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 Q96M66 194 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 TMEM59Q9BXS4 323 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 LINC00574Q9H8X3 128 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 PLGRKTQ9HBL7 147 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 HIF1ANQ9NWT6 349 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 ABRACLQ9P1F3 81 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 RCC2Q9P258 522 aaKnown RBP7.03□□□□□ -1.28
PDGFC-205ENST00000506880 ST3GAL6Q9Y274 331 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 UBE2J1Q9Y385 318 aaPredicted RBP7.03□□□□□ -1.28
PDGFC-205ENST00000506880 INSIG2Q9Y5U4 225 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 LINC00312Q9Y6C7 94 aa7.03□□□□□ -1.28
PDGFC-205ENST00000506880 TEP1Q99973 2627 aaKnown RBP7.03□□□□□ -1.28
PDGFC-205ENST00000506880 IGKV1-12A0A0C4DH73 117 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 TMEM14DPA8MWL7 114 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 DEGS1O15121 323 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 NOL3O60936 208 aaKnown RBP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 IGKV1D-12P01611 117 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 SFTPBP07988 381 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 MGMTP16455 207 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 GZMHP20718 246 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 BCL3P20749 454 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 CD80P33681 288 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 GABRA2P47869 451 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 RPS27AP62979 156 aaKnown RBP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 KRTAP1-1Q07627 177 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 SRSF7Q16629 238 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 SFRP4Q6FHJ7 346 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 C22orf42Q6IC83 251 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 OR52W1Q6IF63 320 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 GLIPR1L1Q6UWM5 242 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 C9orf139Q6ZV77 190 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 MOB1BQ7L9L4 216 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 C1QL2Q7Z5L3 287 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 GAPTQ8N292 157 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 OR56B1Q8NGI3 324 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 NANPQ8TBE9 248 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 C15orf40Q8WUR7 153 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 CREB3L1Q96BA8 519 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 UPRTQ96BW1 309 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 C1orf147Q96MC9 270 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 WDR13Q9H1Z4 485 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 GAL3ST2Q9H3Q3 398 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 PPP1R3EQ9H7J1 279 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 METTL8Q9H825 291 aaKnown RBP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 ZMAT3Q9HA38 289 aaKnown RBP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 RBFOX1Q9NWB1 397 aaKnown RBP7.02□□□□□ -1.29
PDGFC-205ENST00000506880 DCAF16Q9NXF7 216 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 MAB21L2Q9Y586 359 aa7.02□□□□□ -1.29
PDGFC-205ENST00000506880 NIPBLQ6KC79 2804 aaeCLIP7.01□□□□□ -1.29
PDGFC-205ENST00000506880 C2CD3Q4AC94 2353 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms