RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 UBALD2Q8IYN6 164 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 TMEM252Q8N6L7 170 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 OR4X1Q8NH49 305 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 DNASE2BQ8WZ79 361 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 MMABQ96EY8 250 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-208ENST00000506368 FAM71F1Q96KD3 344 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-208ENST00000506368 MRPL13Q9BYD1 178 aaKnown RBP13.85□□□□□ -0.19
SCLT1-208ENST00000506368 ALKBH4Q9NXW9 302 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 MCTS1Q9ULC4 181 aaKnown RBP13.85□□□□□ -0.19
SCLT1-208ENST00000506368 LHFPL6Q9Y693 200 aa13.85□□□□□ -0.19
SCLT1-208ENST00000506368 IGKV1D-8A0A087WSZ0 117 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 ZNF850A8MQ14 1090 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 LINC00614P0C842 121 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 TAS2R30P59541 319 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 IL24Q13007 206 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 ACOT6Q3I5F7 207 aaPredicted RBP13.84□□□□□ -0.19
SCLT1-208ENST00000506368 C5orf24Q7Z6I8 188 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 ADPRHL1Q8NDY3 354 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 ZNF721Q8TF20 911 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 MOB3AQ96BX8 217 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 DDIT4LQ96D03 193 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 Q96M66 194 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 COL25A1Q9BXS0 654 aaPredicted RBP13.84□□□□□ -0.19
SCLT1-208ENST00000506368 VDAC3Q9Y277 283 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 CLEC18AA5D8T8 446 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 MARCH11A6NNE9 402 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 STMND1H3BQB6 276 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 HNRNPA2B1P22626 353 aaKnown RBP13.84□□□□□ -0.19
SCLT1-208ENST00000506368 FAM3BP58499 235 aaPredicted RBP13.84□□□□□ -0.19
SCLT1-208ENST00000506368 FOXF1Q12946 379 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 PRDX4Q13162 271 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 OR8B8Q15620 311 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 TMEM196Q5HYL7 178 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 ZNF100Q8IYN0 542 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 GPR137CQ8N3F9 429 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 CLEC18CQ8NCF0 446 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 VN1R1Q9GZP7 353 aa13.84□□□□□ -0.19
SCLT1-208ENST00000506368 PNO1Q9NRX1 252 aaKnown RBP13.84□□□□□ -0.19
SCLT1-208ENST00000506368 A0A0U1RQV5 110 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 IGSF23A1L1A6 192 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 FAM24AA6NFZ4 105 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 TRDCB7Z8K6 153 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 TNFP01375 233 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 IFNA1P01562 189 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 MBP02144 154 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 DBHP09172 617 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 BCL2P10415 239 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 CASP6P55212 293 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 SP6Q3SY56 376 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 Q6ZS52 159 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 MAML2Q8IZL2 1156 aaPredicted RBP13.83□□□□□ -0.2
SCLT1-208ENST00000506368 TOMM40LQ969M1 308 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 DNAJA3Q96EY1 480 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 BTF3L4Q96K17 158 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 GAL3ST4Q96RP7 486 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 AGMATQ9BSE5 352 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 SLC7A11Q9UPY5 501 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 SNRPCP09234 159 aaKnown RBP13.83□□□□□ -0.2
SCLT1-208ENST00000506368 TNFRSF4P43489 277 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 DCAF10Q5QP82 559 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 C1orf189Q5VU69 101 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 SLC35G3Q8N808 338 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 OR5C1Q8NGR4 320 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 TMEM56Q96MV1 263 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 ATP5SQ99766 215 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 TMEM56-RWDD3S4R434 201 aa13.83□□□□□ -0.2
SCLT1-208ENST00000506368 DMDP11532 3685 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 MYO15AQ9UKN7 3530 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 ANKUB1A6NFN9 424 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 PHF1O43189 567 aaPredicted RBP13.82□□□□□ -0.2
SCLT1-208ENST00000506368 DHRS3O75911 302 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 DDAH2O95865 285 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 IGHG1P01857 330 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 NR2C1P13056 603 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 BIDP55957 195 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 RAB11AP62491 216 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 C6orf201Q7Z4U5 140 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 PRR22Q8IZ63 422 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 D2HGDHQ8N465 521 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 SLC37A2Q8TED4 501 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 TMEM170AQ8WVE7 144 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 LANCL2Q9NS86 450 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 ZDBF2Q9HCK1 2354 aa13.82□□□□□ -0.2
SCLT1-208ENST00000506368 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 MED19A0JLT2 244 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-208ENST00000506368 TMEM210A6NLX4 147 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 MSTNO14793 375 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 EREGO14944 169 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 IL18BPO95998 194 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 CLRN1P58418 232 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 C4orf17Q53FE4 359 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 CRIP3Q6Q6R5 217 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 ZNF321PQ8N8H1 164 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 MBD3L1Q8WWY6 194 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 POM121Q96HA1 1249 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 ABHD14AQ9BUJ0 271 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 ZNF286AQ9HBT8 521 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 MED29Q9NX70 200 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 LRFN1Q9P244 771 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 IGKV3D-11A0A0A0MRZ8 115 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms