RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 A0A0D9SEW6 157 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GNG14A0A1W2PPG7 69 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 E9PAM4 449 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 M0R1B8 84 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CXCR6O00574 342 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IDH3BO43837 385 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SNAP91O60641 907 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MAGEC1O60732 1142 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DPM1O60762 260 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DCTN3O75935 186 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NXPH4O95158 308 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PTTG1O95997 202 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IGHG1P01857 330 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IFNA16P05015 189 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HMGN1P05114 100 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 BCHEP06276 602 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PATE4P0C8F1 98 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HLA-EP13747 358 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GABRG2P18507 467 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KDELR1P24390 212 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SPRP35270 261 aaPredicted RBP3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GPX4P36969 197 aaPredicted RBP3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CD79BP40259 229 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CDKN2BP42772 138 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GPR6P46095 362 aaPredicted RBP3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR1D4P47884 311 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CYB561P49447 251 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RORCP51449 518 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CLDN12P56749 244 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR12D2P58182 307 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SLC1A5Q15758 541 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 C14orf28Q4W4Y0 310 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 YIF1BQ5BJH7 314 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HACD4Q5VWC8 232 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SLC35E4Q6ICL7 350 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PRSS41Q7RTY9 318 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LRRTM1Q86UE6 522 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CARM1Q86X55 608 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IFT20Q8IY31 132 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MMGT1Q8N4V1 131 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 WDSUB1Q8N9V3 476 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR4K17Q8NGC6 315 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR2D3Q8NGH3 330 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR5AR1Q8NGP9 310 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 C11orf45Q8TAV5 145 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR51E1Q8TCB6 317 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM54Q969K7 222 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM230Q96A57 120 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NABP1Q96AH0 204 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM56Q96MV1 263 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ATF6BQ99941 703 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SNRNP25Q9BV90 132 aaKnown RBP3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NUDT9Q9BW91 350 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SELENOIQ9C0D9 397 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RHOFQ9HBH0 211 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM27Q9HBJ8 222 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ABCB9Q9NP78 766 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR12D3Q9UGF7 316 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PCYOX1Q9UHG3 505 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SPATA2Q9UM82 520 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 USP24Q9UPU5 2620 aa3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ASCC3Q8N3C0 2202 aaKnown RBP3.35□□□□□ -1.87
PDLIM1P4-201ENST00000504327 THADAQ6YHU6 1953 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DOCK9Q9BZ29 2069 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 hCG_1818297A0A087WSY0 165 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TRGV8A0A0C4DH27 118 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 EFCAB9A8MZ26 197 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KCNK1O00180 336 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TNFRSF11BO00300 401 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GABRPO00591 440 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 UBDO15205 165 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CST8O60676 142 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 UGT2B11O75310 529 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GATBO75879 557 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CD48P09326 243 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GNAO1P09471 354 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CCDC166P0CW27 439 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SELEP16581 610 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FUT3P21217 361 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 USF1P22415 310 aaPredicted RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PSMA1P25786 263 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SHC1P29353 583 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GCKP35557 465 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TGFBR2P37173 567 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TPI1P60174 286 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LMO4P61968 165 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PPP1CBP62140 327 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SRPXP78539 464 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GNA12Q03113 381 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PRPSAP1Q14558 356 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PAFAH1B3Q15102 231 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PTGES3Q15185 160 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SLC9A3R2Q15599 337 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ATP6AP1Q15904 470 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF876PQ49A33 203 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF658BQ4V348 819 aaPredicted RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 C14orf177Q52M58 125 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KLF17Q5JT82 389 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms