RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 RIMS4Q9H426 269 aaPredicted RBP10.33□□□□□ -0.76
NUP54-202ENST00000502850 RHOFQ9HBH0 211 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 TAS2R3Q9NYW6 316 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 PLA2G3Q9NZ20 509 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 MPC1Q9Y5U8 109 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 KNTC1P50748 2209 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 A0A096LPE4 126 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 A0A1W2PPZ6 126 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 BET1O15155 118 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 FGF16O43320 207 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 OR7C1O76099 320 aaPredicted RBP10.33□□□□□ -0.76
NUP54-202ENST00000502850 HLA-HP01893 362 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 CCNOP22674 350 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 SOX8P57073 446 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 S100A10P60903 97 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 RAB1AP62820 205 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 RAB32Q13637 225 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 ZNF585AQ6P3V2 769 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 OR10C1Q96KK4 312 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 POM121L2Q96KW2 1035 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 LDAHQ9H6V9 325 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 PLEKHA2Q9HB19 425 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 BARX1Q9HBU1 254 aaPredicted RBP10.33□□□□□ -0.76
NUP54-202ENST00000502850 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 GLRX2Q9NS18 164 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 IL17BQ9UHF5 180 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 GPR160Q9UJ42 338 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 AKAP13Q12802 2813 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 TRGV5A0A0B4J1U4 118 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 KIR2DS1A0A191URI9 304 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 ANKRD30BLA7E2S9 258 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 H0YIZ8 118 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 TRAPPC2LH3BP13 241 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 DIRAS3O95661 229 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 GLAP06280 429 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 CTXN2P0C2S0 81 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 FCGR2CP31995 323 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 OPRM1P35372 400 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 KIR2DS4P43632 304 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 ARG2P78540 354 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 CLN3Q13286 438 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 KIR2DS1Q14954 304 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 FAM74A1Q5RGS3 127 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 UNQ6126/PRO20091Q6UXV3 157 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 TMPRSS7Q7RTY8 843 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 CALHM1Q8IU99 346 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 LGI3Q8N145 548 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 RTN4IP1Q8WWV3 396 aaPredicted RBP10.32□□□□□ -0.76
NUP54-202ENST00000502850 GTF3AQ92664 365 aaKnown RBP10.32□□□□□ -0.76
NUP54-202ENST00000502850 TOMM40LQ969M1 308 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 ARL11Q969Q4 196 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 MARC2Q969Z3 335 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 ZC4H2Q9NQZ6 224 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 OR5AC2Q9NZP5 309 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 GSKIPQ9P0R6 139 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 SPEF1Q9Y4P9 236 aa10.32□□□□□ -0.76
NUP54-202ENST00000502850 ARHGAP21Q5T5U3 1957 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 SLC22A20A6NK97 555 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 K7EPK0 472 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 DEDDO75618 318 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 GAPDHP04406 335 aaKnown RBP10.31□□□□□ -0.76
NUP54-202ENST00000502850 MRPL49Q13405 166 aaKnown RBP10.31□□□□□ -0.76
NUP54-202ENST00000502850 IL13RA2Q14627 380 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 ZNF766Q5HY98 468 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 FBXW9Q5XUX1 488 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 ZNF573Q86YE8 665 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 FAM71E2Q8N5Q1 922 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 OR1K1Q8NGR3 316 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 EXTL1Q92935 676 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 SAT2Q96F10 170 aaPredicted RBP10.31□□□□□ -0.76
NUP54-202ENST00000502850 RRNAD1Q96FB5 475 aaKnown RBP10.31□□□□□ -0.76
NUP54-202ENST00000502850 RSRP1Q9BUV0 290 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 SLC5A7Q9GZV3 580 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 SLC2A9Q9NRM0 540 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 TMEM100Q9NV29 134 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 RCC2Q9P258 522 aaKnown RBP10.31□□□□□ -0.76
NUP54-202ENST00000502850 IGF2RP11717 2491 aa10.31□□□□□ -0.76
NUP54-202ENST00000502850 CD300LBA8K4G0 201 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 E5RGE8 158 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 MSTNO14793 375 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 TK1P04183 234 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 HAAOP46952 286 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 TAGLNQ01995 201 aaKnown RBP10.3□□□□□ -0.76
NUP54-202ENST00000502850 TMEM187Q14656 261 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 TUSC1Q2TAM9 212 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 C9orf135Q5VTT2 229 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 GGNBP1Q5YKI7 109 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 IL34Q6ZMJ4 242 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 NUFIP2Q7Z417 695 aaKnown RBP10.3□□□□□ -0.76
NUP54-202ENST00000502850 NAXEQ8NCW5 288 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 PKIBQ9C010 78 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 CYTL1Q9NRR1 136 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 NSG2Q9Y328 171 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 TMED3Q9Y3Q3 217 aa10.3□□□□□ -0.76
NUP54-202ENST00000502850 DUXBA0A1W2PPF3 345 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 MPTX1A8MV57 137 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 ZNF732B4DXR9 585 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 H7C1Q1 480 aa10.29□□□□□ -0.76
NUP54-202ENST00000502850 JTBO76095 146 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms