RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 TRAV1-2A0A0B4J238 106 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 PNMA8CA0A1B0GUJ8 204 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 A0A1B0GW55 424 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 TRDV1A0A1B0GX56 115 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 FUOMA2VDF0 154 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 MGST3O14880 152 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 DUX4L2P0CJ85 424 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 DUX4L3P0CJ86 424 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 DUX4L4P0CJ87 422 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 DUX4L5P0CJ88 424 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 DUX4L6P0CJ89 424 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 DUX4L7P0CJ90 424 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 HSMCR30P0CW71 290 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 MAP2K4P45985 399 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 GABRA2P47869 451 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 CAPZA1P52907 286 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 COL10A1Q03692 680 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 SSX1Q16384 188 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 MPV17LQ2QL34 196 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 C1orf100Q5SVJ3 147 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 METTL11BQ5VVY1 283 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 GLT8D1Q68CQ7 371 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 DUX4L9Q6RFH8 374 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 C17orf107Q6ZR85 190 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 CEACAM19Q7Z692 300 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 LRRTM1Q86UE6 522 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 ST8SIA4Q92187 359 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 C1orf147Q96MC9 270 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 WDFY2Q96P53 400 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 SPACA5Q96QH8 159 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 TMED9Q9BVK6 235 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 SLITRK2Q9H156 845 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 PRDM13Q9H4Q3 707 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 EXOSC4Q9NPD3 245 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 DUX4Q9UBX2 424 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 NUP50Q9UKX7 468 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 ARHGAP32A7KAX9 2087 aa8.85□□□□□ -0.99
UBE2D3-212ENST00000502563 A0A087WXM4 84 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 hCG_1809904A0A1W2PP81 198 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 A0A1W2PPE2 198 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 A0A1W2PR64 198 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 A0A1W2PRV1 198 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 MAGEA13PA6NCF6 341 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 ANGPTL7O43827 346 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 TMEM127O75204 238 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 OR2H2O95918 312 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 GLAP06280 429 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 GTF2F2P13984 249 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 PRKACAP17612 351 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 OR3A4PP47883 348 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 RPS25P62851 125 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 RPL31P62899 125 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 IKZF1Q13422 519 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 RSU1Q15404 277 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 Q6P435 159 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 RNF144BQ7Z419 303 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 TMEM185AQ8NFB2 350 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 OR5D18Q8NGL1 313 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 CORO2AQ92828 525 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 RFT1Q96AA3 541 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 NR1H4Q96RI1 486 aaPredicted RBP8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 S100A13Q99584 98 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 METTL8Q9H825 291 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 SPACA1Q9HBV2 294 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 FBLN5Q9UBX5 448 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 LINC00312Q9Y6C7 94 aa8.84□□□□□ -0.99
UBE2D3-212ENST00000502563 A0A0G2JK05 382 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 TMEM82A0PJX8 343 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 SLC22A1O15245 554 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 PSPNO60542 156 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 TOX4O94842 621 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 BPNT1O95861 308 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 CSTBP04080 98 aaKnown RBP8.83□□□□□ -1
UBE2D3-212ENST00000502563 MAS1P04201 325 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 SELLP14151 372 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 NDUFB7P17568 137 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 PRTN3P24158 256 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 FPR2P25090 351 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 SRP14P37108 136 aaKnown RBP8.83□□□□□ -1
UBE2D3-212ENST00000502563 RBM11P57052 281 aaKnown RBP8.83□□□□□ -1
UBE2D3-212ENST00000502563 GMFBP60983 142 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 FABP5Q01469 135 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 GUCA2AQ02747 115 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 BLMHQ13867 455 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 KLF17Q5JT82 389 aaPredicted RBP8.83□□□□□ -1
UBE2D3-212ENST00000502563 NCR3LG1Q68D85 454 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 GDPGP1Q6ZNW5 385 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 GDPD3Q7L5L3 318 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 OSR2Q8N2R0 312 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 OR6M1Q8NGM8 313 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 ZFAND2BQ8WV99 257 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 TBX15Q96SF7 602 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 CST11Q9H112 138 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 PPIL3Q9H2H8 161 aaKnown RBP8.83□□□□□ -1
UBE2D3-212ENST00000502563 VCX3AQ9NNX9 186 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 RCC2Q9P258 522 aaKnown RBP8.83□□□□□ -1
UBE2D3-212ENST00000502563 OR14J1Q9UGF5 321 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 MRPS28Q9Y2Q9 187 aaKnown RBP8.83□□□□□ -1
UBE2D3-212ENST00000502563 MXRA5Q9NR99 2828 aa8.83□□□□□ -1
UBE2D3-212ENST00000502563 DSCAML1Q8TD84 2053 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms