RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PRKACAP17612 351 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 CEACAM3P40198 252 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 LUMP51884 338 aaPredicted RBP11.61□□□□□ -0.55
TRAF4-212ENST00000498540 FUT6P51993 359 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 RBM39Q14498 530 aaKnown RBP11.61□□□□□ -0.55
TRAF4-212ENST00000498540 ZNF146Q15072 292 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 SSX6Q7RTT6 188 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 Q8IYB0 196 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 ENTHD1Q8IYW4 607 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 BORCS8Q96FH0 119 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 PRR25Q96S07 402 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 TEX12Q9BXU0 123 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 CHST5Q9GZS9 411 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 LINC00527Q9UJ94 153 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 B2RBV5 119 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 SYT7O43581 403 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 GATBO75879 557 aaKnown RBP11.6□□□□□ -0.55
TRAF4-212ENST00000498540 SLC6A1P30531 599 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 MNDAP41218 407 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 GLIPR1P48060 266 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 POU3F4P49335 361 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 ACTR3P61158 418 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 CATSPERDQ86XM0 798 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 ARHGAP24Q8N264 748 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 CHPT1Q8WUD6 406 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 CORO2AQ92828 525 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 CCDC124Q96CT7 223 aaKnown RBP11.6□□□□□ -0.55
TRAF4-212ENST00000498540 RAX2Q96IS3 184 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 ASCL2Q99929 193 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 MED4Q9NPJ6 270 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 TAS2R3Q9NYW6 316 aa11.6□□□□□ -0.55
TRAF4-212ENST00000498540 ZMAT5Q9UDW3 170 aaKnown RBP11.6□□□□□ -0.55
TRAF4-212ENST00000498540 DYNC2H1Q8NCM8 4307 aaKnown RBP11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A18PA6NE21 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A16PA6NEW6 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A20PA6NIJ5 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A9PA6NNJ1 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A12PA8MX19 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A5PA8MXJ8 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 OOSP1A8MZH6 123 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 ZNF670-ZNF695F2Z2N8 137 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 TOR1AO14656 332 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 RAMP3O60896 148 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 OR2H2O95918 312 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A15PP0C7V4 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A13PP0C7W8 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A14PP0C7W9 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM90A24PP0C7X0 464 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 FAM106CPP0CH98 169 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 ANXA8P13928 327 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 CRISP1P54107 249 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 RAB25P57735 213 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 CDC42P60953 191 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 AESQ08117 197 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
TRAF4-212ENST00000498540 CCDC144NLQ6NUI1 221 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 MEPCEQ7L2J0 689 aaKnown RBP11.59□□□□□ -0.55
TRAF4-212ENST00000498540 ZNF695Q8IW36 515 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 C5orf56Q8N8D9 126 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 YIPF7Q8N8F6 280 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 OR56B4Q8NH76 319 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 CANT1Q8WVQ1 401 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 CREB3L1Q96BA8 519 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 ASB9Q96DX5 294 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 LRGUKQ96M69 825 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 MNTQ99583 582 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 ZFP57Q9NU63 452 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 CLN6Q9NWW5 311 aa11.59□□□□□ -0.55
TRAF4-212ENST00000498540 A0A087X0M5 115 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 IGKV1-9A0A0C4DH69 117 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 A0A1B0GX30 115 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 ODAMA1E959 279 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 SERPINE3A8MV23 424 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 PTGFRP43088 359 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 RBP2P50120 134 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 PRRX1P54821 245 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 DEFB136Q30KP8 78 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 OR4D6Q8NGJ1 314 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 TOMM40LQ969M1 308 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 COQ2Q96H96 371 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 TBX5Q99593 518 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 HMG20AQ9NP66 347 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 EXOSC4Q9NPD3 245 aaKnown RBP11.58□□□□□ -0.56
TRAF4-212ENST00000498540 ING3Q9NXR8 418 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 GLS2Q9UI32 602 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 GSTK1Q9Y2Q3 226 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 ARL2BPQ9Y2Y0 163 aa11.58□□□□□ -0.56
TRAF4-212ENST00000498540 IGKV1-12A0A0C4DH73 117 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 LOC107986453A0A1B0GWG9 222 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 A0A1W2PPI3 338 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 CCL24O00175 119 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 SH2D1BO14796 132 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 DCTN3O75935 186 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 ZFPL1O95159 310 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 IGKV1D-12P01611 117 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 KRT8P05787 483 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 NFYBP25208 207 aa11.57□□□□□ -0.56
TRAF4-212ENST00000498540 MNAT1P51948 309 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms