RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 OR56B2PQ8NGI1 322 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 OR56B1Q8NGI3 324 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 OR5A2Q8NGI9 324 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 OR1J1Q8NGS3 322 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 ENKURQ8TC29 256 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 NPRL2Q8WTW4 380 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 TNFAIP8L1Q8WVP5 186 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 RND1Q92730 232 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 YIPF5Q969M3 257 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 ST6GAL2Q96JF0 529 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 SPACA5Q96QH8 159 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 VKORC1Q9BQB6 163 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 NUDT16L1Q9BRJ7 211 aaKnown RBP4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 BCL2L14Q9BZR8 327 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 SCPEP1Q9HB40 452 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 ELL3Q9HB65 397 aaPredicted RBP4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 RBFOX1Q9NWB1 397 aaKnown RBP4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 NOP16Q9Y3C1 178 aaKnown RBP4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 CACNG2Q9Y698 323 aa4.52□□□□□ -1.69
HMGXB4-208ENST00000498325 DOCK7Q96N67 2140 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 TRGV8A0A0C4DH27 118 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 GAGE12BA1L429 117 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 GAGE12HA6NDE8 117 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 DNAJC9-AS1A6NH13 148 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 OR5B21A6NL26 309 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 CD300LBA8K4G0 201 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ZNF850A8MQ14 1090 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 EEF1E1-BLOC1S5C9J1V9 151 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 H3BUI4 141 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 H7C417 338 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 PLA2G10O15496 165 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 TPD52L2O43399 206 aaKnown RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ORC5O43913 435 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 SMPD2O60906 423 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 CRYZL1O95825 349 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 CRYAAP02489 173 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 CSF1P09603 554 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 CD3GP09693 182 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 SPNP16150 400 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ANOS1P23352 680 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 GCH1P30793 250 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 RCVRNP35243 200 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 OR3A4PP47883 348 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 VEGFCP49767 419 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 MECP2P51608 486 aaKnown RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 EFNB2P52799 333 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ACTBP60709 375 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ACTG1P63261 375 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 QRFPP83859 136 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 PRDX4Q13162 271 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 SNTB2Q13425 540 aaKnown RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 TNK1Q13470 666 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 PPA1Q15181 289 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 RSU1Q15404 277 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 PNLIPRP3Q17RR3 467 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 CEACAM21Q3KPI0 293 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ZNF718Q3SXZ3 478 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 CDNFQ49AH0 187 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 SLC22A6Q4U2R8 563 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM177Q53S58 311 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 SIGIRRQ6IA17 410 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 OR10K2Q6IF99 312 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ZNF474Q6S9Z5 364 aaPredicted RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 PLET1Q6UQ28 207 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 FBXW12Q6X9E4 464 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ASCL4Q6XD76 172 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 C3P1Q6ZMU1 363 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 NRARPQ7Z6K4 114 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 MKXQ8IYA7 352 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 SAXO1Q8IYX7 474 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 RPRMLQ8N4K4 120 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 PAQR4Q8N4S7 273 aaPredicted RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ZSCAN4Q8NAM6 433 aaPredicted RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 DUSP18Q8NEJ0 188 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 WFDC11Q8NEX6 87 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 PXT1Q8NFP0 134 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 OR51T1Q8NGJ9 327 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 OR10R2Q8NGX6 335 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 OR52I2Q8NH67 350 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 SLC25A40Q8TBP6 338 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 SUN5Q8TC36 379 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ZFAND1Q8TCF1 268 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 CMBLQ96DG6 245 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 MRPS24Q96EL2 167 aaKnown RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 LRRC46Q96FV0 321 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 ZC3HAV1LQ96H79 300 aaKnown RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 C18orf12Q96KH6 178 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 MICU1Q9BPX6 476 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM246Q9BRR3 403 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 PAPOLGQ9BWT3 736 aaKnown RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 C1QTNF6Q9BXI9 259 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 TMEM59Q9BXS4 323 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 C11orf54Q9H0W9 315 aaPredicted RBP4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 LPAR5Q9H1C0 372 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 OR10A4Q9H209 315 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 DPAGT1Q9H3H5 408 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 AUNIPQ9H7T9 357 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 COPZ2Q9P299 210 aa4.51□□□□□ -1.69
HMGXB4-208ENST00000498325 MYEF2Q9P2K5 600 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms