RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 DVL3Q92997 716 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 FBXW5Q969U6 566 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 DACT3Q96B18 629 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 MEGF10Q96KG7 1140 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 CNTNAP3BQ96NU0 1288 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 OR2V2Q96R30 315 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 GINS4Q9BRT9 223 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 FAAP24Q9BTP7 215 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 DPCDQ9BVM2 203 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 CNTNAP3Q9BZ76 1288 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 MRPL37Q9BZE1 423 aaKnown RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 ALX4Q9H161 411 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 C20orf85Q9H1P6 137 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 MMP28Q9H239 520 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 HES4Q9HCC6 221 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 NPDC1Q9NQX5 325 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 C1orf123Q9NWV4 160 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 ETAA1Q9NY74 926 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 DNAJB11Q9UBS4 358 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 SLC23A1Q9UHI7 598 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 AK3Q9UIJ7 227 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 ANAPC10Q9UM13 185 aa7.17□□□□□ -1.26
SF3A1-210ENST00000498259 TLN1Q9Y490 2541 aaKnown RBP7.17□□□□□ -1.26
SF3A1-210ENST00000498259 LAMA5O15230 3695 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 RP1L1Q8IWN7 2480 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-210ENST00000498259 H0YL77 283 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 RHBDL1O75783 438 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 HAND1O96004 215 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 TK1P04183 234 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 RLN1P04808 185 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 MUC1P15941 1255 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-210ENST00000498259 LMO1P25800 156 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 S100GP29377 79 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 HRH1P35367 487 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 UBE2MP61081 183 aaKnown RBP7.16□□□□□ -1.26
SF3A1-210ENST00000498259 MICBQ29980 383 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 ALKBH6Q3KRA9 238 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 SCGB2B2Q4G0G5 96 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 PAN3Q58A45 887 aaKnown RBP7.16□□□□□ -1.26
SF3A1-210ENST00000498259 LPCAT3Q6P1A2 487 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 FAHD2BQ6P2I3 314 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-210ENST00000498259 TRAT1Q6PIZ9 186 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 WDR82Q6UXN9 313 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 Q6ZR03 302 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 AKAP14Q86UN6 197 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 OR51S1Q8NGJ8 323 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 OR5D13Q8NGL4 314 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 TERB2Q8NHR7 220 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 LINC01560Q8TB33 94 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 ZFAND1Q8TCF1 268 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 Q8TCH9 128 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 CHAC2Q8WUX2 184 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 FAHD2AQ96GK7 314 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 SULT4A1Q9BR01 284 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 PPA2Q9H2U2 334 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 SAP30LQ9HAJ7 183 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 ING3Q9NXR8 418 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 CISD1Q9NZ45 108 aaKnown RBP7.16□□□□□ -1.26
SF3A1-210ENST00000498259 KCNIP1Q9NZI2 227 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 RNF7Q9UBF6 113 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 METRNQ9UJH8 293 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 PPP1R3CQ9UQK1 317 aa7.16□□□□□ -1.26
SF3A1-210ENST00000498259 POLEQ07864 2286 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 TRAV6A0A075B6T7 132 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 TRBV6-6A0A0A6YYG2 114 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 A0A1B0GVG6 124 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 ZSCAN5BA6NJL1 495 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 SNRPGP15A8MWD9 76 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 SHISA9B4DS77 424 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 HS3ST1O14792 307 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 SSX5O60225 188 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 CREBL2O60519 120 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-210ENST00000498259 SNAPC5O75971 98 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 DIRAS3O95661 229 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 IGHV1-46P01743 117 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 IL5P05113 134 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 FCGR3AP08637 254 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 MECP2P51608 486 aaKnown RBP7.15□□□□□ -1.26
SF3A1-210ENST00000498259 CCR6P51684 374 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF672Q499Z4 452 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-210ENST00000498259 SIGIRRQ6IA17 410 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 ACP7Q6ZNF0 438 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 C22orf34Q6ZV56 151 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 PEG10Q86TG7 708 aaKnown RBP7.15□□□□□ -1.26
SF3A1-210ENST00000498259 WDR86Q86TI4 376 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 ZNF554Q86TJ5 538 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 LRP11Q86VZ4 500 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 MUC15Q8N387 334 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 SUMF2Q8NBJ7 301 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 LRRC29Q8WV35 223 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 ITLN2Q8WWU7 325 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-210ENST00000498259 PIK3IP1Q96FE7 263 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 FGF23Q9GZV9 251 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-210ENST00000498259 RAB1BQ9H0U4 201 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 MED28Q9H204 178 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 MYOZ1Q9NP98 299 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-210ENST00000498259 UFSP2Q9NUQ7 469 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 EHFQ9NZC4 300 aa7.15□□□□□ -1.26
SF3A1-210ENST00000498259 C14orf166Q9Y224 244 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms