RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 PQLC1Q8N2U9 271 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 CBR4Q8N4T8 237 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 SPSB1Q96BD6 273 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 RNFT2Q96EX2 444 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 OPALINQ96PE5 141 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 OR5M11Q96RB7 305 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 MBOAT4Q96T53 435 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 HMG20AQ9NP66 347 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 EXOSC4Q9NPD3 245 aaKnown RBP13.79□□□□□ -0.2
SMC4-226ENST00000497311 GSTK1Q9Y2Q3 226 aa13.79□□□□□ -0.2
SMC4-226ENST00000497311 UBE2J1Q9Y385 318 aaPredicted RBP13.79□□□□□ -0.2
SMC4-226ENST00000497311 KIAA2026Q5HYC2 2103 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 FUOMA2VDF0 154 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 SIRPB1O00241 398 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 SLC16A6O15403 523 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 XPNPEP2O43895 674 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 ALDOBP05062 364 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 HTR1DP28221 377 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 VDAC2P45880 294 aaPredicted RBP13.78□□□□□ -0.2
SMC4-226ENST00000497311 OR3A1P47881 315 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 P2RX3P56373 397 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 NANOS3P60323 173 aaKnown RBP13.78□□□□□ -0.2
SMC4-226ENST00000497311 BLCAPP62952 87 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 IL18R1Q13478 541 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 FDX2Q6P4F2 183 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 RFT1Q96AA3 541 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 R3HDM4Q96D70 268 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 HRASLS5Q96KN8 279 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 C9orf16Q9BUW7 83 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 WNT10AQ9GZT5 417 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 MMP28Q9H239 520 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 GAL3ST2Q9H3Q3 398 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 HHLA2Q9UM44 414 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 PCDHGB5Q9Y5G0 923 aa13.78□□□□□ -0.2
SMC4-226ENST00000497311 TRGV10A0A0A0MS01 117 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 FAM90A22PA8MWA6 464 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 E9PQ18 207 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 J3QRE1 110 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 MMP23AO75900 390 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 OR2H2O95918 312 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 CCR9P51686 369 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 SNRPGP62308 76 aaKnown RBP13.77□□□□□ -0.21
SMC4-226ENST00000497311 SLC25A30Q5SVS4 291 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 MEDAGQ5VYS4 303 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 OR52W1Q6IF63 320 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 Q6ZS46 218 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 OR4F17Q8NGA8 305 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 OR4P4Q8NGL7 312 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 OR13C3Q8NGS6 347 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 WIPF2Q8TF74 440 aaPredicted RBP13.77□□□□□ -0.21
SMC4-226ENST00000497311 OR4F4Q96R69 305 aa13.77□□□□□ -0.21
SMC4-226ENST00000497311 CITED2Q99967 270 aaPredicted RBP13.77□□□□□ -0.21
SMC4-226ENST00000497311 IGKV1-12A0A0C4DH73 117 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 SNTNA6NMZ2 147 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 J3QLW9 94 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 KDM4BO94953 1096 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 IGKV1D-12P01611 117 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 MT-ND2P03891 347 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 ZNF19P17023 458 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 LMO1P25800 156 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 AESQ08117 197 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 PRAMEF5Q5TYX0 476 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 RTN4RL2Q86UN3 420 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 ACBD7Q8N6N7 88 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 OR51A4Q8NGJ6 313 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 OR13C9Q8NGT0 318 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 OR10AC1Q8NH08 325 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 ZNF596Q8TC21 504 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 STMN2Q93045 179 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 SPACA5Q96QH8 159 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 NEK6Q9HC98 313 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 TAS2R3Q9NYW6 316 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 DPM3Q9P2X0 92 aa13.76□□□□□ -0.21
SMC4-226ENST00000497311 BAG2O95816 211 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 PRB2P02812 416 aaPredicted RBP13.75□□□□□ -0.21
SMC4-226ENST00000497311 ZNF44P15621 663 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 CDK2P24941 298 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 BRS3P32247 399 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 BDH1Q02338 343 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 SCN1BQ07699 218 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 ALKBH1Q13686 389 aaKnown RBP13.75□□□□□ -0.21
SMC4-226ENST00000497311 TMEM95Q3KNT9 176 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 ZIK1Q3SY52 487 aaPredicted RBP13.75□□□□□ -0.21
SMC4-226ENST00000497311 FBLN7Q53RD9 439 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 OXLD1Q5BKU9 147 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 HEPN1Q6WQI6 88 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 C16orf82Q7Z2V1 217 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 REC114Q7Z4M0 266 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 OR5D18Q8NGL1 313 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 CAPSLQ8WWF8 208 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 CORO2AQ92828 525 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 PELI1Q96FA3 418 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 MRPL48Q96GC5 212 aaKnown RBP13.75□□□□□ -0.21
SMC4-226ENST00000497311 AKR1E2Q96JD6 320 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 C4orf36Q96KX1 117 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 MYCBPQ99417 103 aaPredicted RBP13.75□□□□□ -0.21
SMC4-226ENST00000497311 SLC29A1Q99808 456 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 OCSTAMPQ9BR26 566 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 COMMD4Q9H0A8 199 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms