RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 KCNE5Q9UJ90 142 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 LAMP3Q9UQV4 416 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ORC6Q9Y5N6 252 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 SIPA1L1O43166 1804 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 COL4A3Q01955 1670 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 MYH8P13535 1937 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 PLXND1Q9Y4D7 1925 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A087WUU8 490 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A0B4J2E0 115 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A0G2JMM0 328 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 CCDC195A0A1B0GUA6 201 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1B0GX12 115 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1W2PPB8 328 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 MYADML2A6NDP7 307 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM166BA8MTA8 275 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FABP5P3A8MUU1 101 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 KIR3DP1A8MWS1 328 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 J3KR12 359 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 MPPED1O15442 326 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 PLPP2O43688 288 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FGF17O60258 216 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GALR3O60755 368 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR7C1O76099 320 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 HLA-DQB1P01920 261 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 HLA-DOAP06340 250 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4A8P0C604 315 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF43P17038 809 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 IDSP22304 550 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 NFYAP23511 347 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ATP6V0CP27449 155 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TNFSF8P32971 234 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 MAGEA5P43359 124 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 RPS10P46783 165 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TAF6P49848 677 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 DVL1P1P54792 670 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 AQP5P55064 265 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR12D2P58182 307 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 PROK1P58294 105 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 RPS25P62851 125 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 CRADDP78560 199 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM267Q0VDI3 215 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 RBM39Q14498 530 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 SSX1Q16384 188 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM183BQ1AE95 376 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 C1orf220Q5T0J3 134 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 SPATA31B1PQ5VZV4 182 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 MFSD12Q6NUT3 480 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 HEPN1Q6WQI6 88 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 IL34Q6ZMJ4 242 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ADAMTSL5Q6ZMM2 481 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 MOB1BQ7L9L4 216 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF547Q8IVP9 402 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FBXO16Q8IX29 292 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM183AQ8IXX5 376 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM24BQ8N5W8 94 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR11H7Q8NGC8 314 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR1B1Q8NGR6 318 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR2T35Q8NGX2 323 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR2AJ1Q8NGZ0 328 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR2G3Q8NGZ4 309 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FBXO25Q8TCJ0 367 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ACER1Q8TDN7 264 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 LRRC15Q8TF66 581 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 PHYHIPLQ96FC7 376 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 SDSLQ96GA7 329 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TIMD4Q96H15 378 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GPER1Q99527 375 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 C1QTNF4Q9BXJ3 329 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 DEFB129Q9H1M3 183 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR51I1Q9H343 314 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 RHOJQ9H4E5 214 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 CWH43Q9H720 699 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ACKR4Q9NPB9 350 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 RPS10P5Q9NQ39 176 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 PHPT1Q9NRX4 125 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 DCAF13Q9NV06 445 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 C1orf123Q9NWV4 160 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 VAX2Q9UIW0 290 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 MCTS1Q9ULC4 181 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 KCNS2Q9ULS6 477 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 HS3ST2Q9Y278 367 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 LSM5Q9Y4Y9 91 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 QRICH2Q9H0J4 1663 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 CHD2O14647 1828 aaKnown RBP2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 OTOFQ9HC10 1997 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 TRAV36DV7A0A075B6V5 113 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4C46A6NHA9 309 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM183AA6NL82 134 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HMSDA8MTL9 139 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 MCRIP1C9JLW8 97 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 H7BYZ3 331 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 J3KT08 172 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 SOCS2O14508 198 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BKO60814 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BJP06899 126 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 CRYGDP07320 174 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 CD14P08571 375 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 CT45A6P0DMU7 189 aa2.65□□□□□ -1.98
SNRNP48-202ENST00000496946 CT45A5P0DMU8 189 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms