RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 GSTK1Q9Y2Q3 226 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 SESN1Q9Y6P5 492 aa11.52□□□□□ -0.57
VTI1A-209ENST00000496445 IGHV2-26A0A0B4J1V2 119 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 A6NDX4 124 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 SNTNA6NMZ2 147 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 E9PI62 339 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 OR2H2O95918 312 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 ERP29P30040 261 aaKnown RBP11.51□□□□□ -0.57
VTI1A-209ENST00000496445 ZP1P60852 638 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 FAM189A2Q15884 450 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 SSX2Q16385 188 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 BAIAP2L2Q6UXY1 529 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 TMEM219Q86XT9 240 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 FAM110DQ8TAY7 271 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-209ENST00000496445 CFHR4Q92496 578 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 MALSU1Q96EH3 234 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 NKX3-1Q99801 234 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-209ENST00000496445 NPFFR1Q9GZQ6 430 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 ZCCHC4Q9H5U6 513 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 EXOSC4Q9NPD3 245 aaKnown RBP11.51□□□□□ -0.57
VTI1A-209ENST00000496445 ERVK13-1Q9NX77 482 aa11.51□□□□□ -0.57
VTI1A-209ENST00000496445 LOC100130705A0A1B0GUX0 176 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 MGST3O14880 152 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 MPZL2O60487 215 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 ZFPL1O95159 310 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 RAB40BQ12829 278 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 DYNC1I2Q13409 638 aaKnown RBP11.5□□□□□ -0.57
VTI1A-209ENST00000496445 HABP2Q14520 560 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-209ENST00000496445 Q6P435 159 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 C11orf88Q6PI97 169 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 PQLC1Q8N2U9 271 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 C11orf44Q8N8P7 122 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 OR52I1Q8NGK6 324 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 OR4P4Q8NGL7 312 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 OR2T6Q8NHC8 308 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 RGP1Q92546 391 aaPredicted RBP11.5□□□□□ -0.57
VTI1A-209ENST00000496445 PDCD1LG2Q9BQ51 273 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 TMEM133Q9H2Q1 129 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 INPP5EQ9NRR6 644 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 FAM118AQ9NWS6 357 aa11.5□□□□□ -0.57
VTI1A-209ENST00000496445 TMEM212A6NML5 194 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 SULT1B1O43704 296 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 CSF1P09603 554 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 OCM2P0CE71 109 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 OCMP0CE72 109 aaPredicted RBP11.49□□□□□ -0.57
VTI1A-209ENST00000496445 LIMS3P0CW19 117 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 LIMS4P0CW20 117 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 LMO1P25800 156 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 GDNFP39905 211 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 DYNLT3P51808 116 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 IL18R1Q13478 541 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 MINOS1Q5TGZ0 78 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 PRAMEF5Q5TYX0 476 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 ZBTB49Q6ZSB9 765 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 Q6ZTK2 550 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 SAXO1Q8IYX7 474 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 Q8N2B8 174 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 PARP16Q8N5Y8 322 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 RPS4Y2Q8TD47 263 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 MRPL48Q96GC5 212 aaKnown RBP11.49□□□□□ -0.57
VTI1A-209ENST00000496445 COQ2Q96H96 371 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 Q96MT0 163 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 CDCA4Q9BXL8 241 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 NEK6Q9HC98 313 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 ABCB10Q9NRK6 738 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 SERTAD4Q9NUC0 356 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 MRPS18AQ9NVS2 196 aaKnown RBP11.49□□□□□ -0.57
VTI1A-209ENST00000496445 GLS2Q9UI32 602 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 UBE2J1Q9Y385 318 aaPredicted RBP11.49□□□□□ -0.57
VTI1A-209ENST00000496445 HILPDAQ9Y5L2 63 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 MINOS1-NBL1R4GNA1 71 aa11.49□□□□□ -0.57
VTI1A-209ENST00000496445 A0A0G2JK05 382 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 SLC33A1O00400 549 aaPredicted RBP11.48□□□□□ -0.57
VTI1A-209ENST00000496445 WBP4O75554 376 aaKnown RBP11.48□□□□□ -0.57
VTI1A-209ENST00000496445 ALX3O95076 343 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 FADS2O95864 444 aaKnown RBP11.48□□□□□ -0.57
VTI1A-209ENST00000496445 VSIG10L2P0DP72 767 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 GLIPR1P48060 266 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 GTF2A1P52655 376 aaPredicted RBP11.48□□□□□ -0.57
VTI1A-209ENST00000496445 AESQ08117 197 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 CDK5R1Q15078 307 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 KISS1Q15726 138 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 SMN1Q16637 294 aaKnown RBP11.48□□□□□ -0.57
VTI1A-209ENST00000496445 LPCAT4Q643R3 524 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 ZNF529Q6P280 563 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 TRAPPC6BQ86SZ2 158 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
VTI1A-209ENST00000496445 RHOFQ9HBH0 211 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 DHDHQ9UQ10 334 aa11.48□□□□□ -0.57
VTI1A-209ENST00000496445 RPL36Q9Y3U8 105 aaKnown RBP11.48□□□□□ -0.57
VTI1A-209ENST00000496445 PLXNB1O43157 2135 aa11.47□□□□□ -0.57
VTI1A-209ENST00000496445 FAM172BPA6NC97 362 aa11.47□□□□□ -0.57
VTI1A-209ENST00000496445 SH2D1BO14796 132 aa11.47□□□□□ -0.57
VTI1A-209ENST00000496445 CSN2P05814 226 aa11.47□□□□□ -0.57
VTI1A-209ENST00000496445 HCKP08631 526 aa11.47□□□□□ -0.57
VTI1A-209ENST00000496445 CCDC159P0C7I6 412 aa11.47□□□□□ -0.57
VTI1A-209ENST00000496445 ZNF44P15621 663 aa11.47□□□□□ -0.57
VTI1A-209ENST00000496445 SLC34A1Q06495 639 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms