RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 EXOSC4Q9NPD3 245 aaKnown RBP12.77□□□□□ -0.37
HDAC4-213ENST00000496347 KIAA2026Q5HYC2 2103 aa12.77□□□□□ -0.37
HDAC4-213ENST00000496347 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 FAM90A8PA6NJQ4 464 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 E9PI62 339 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 SH2D1BO14796 132 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 TIMM23O14925 209 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 CSN2P05814 226 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 MYL12AP19105 171 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 ZP1P60852 638 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 C11orf88Q6PI97 169 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 OR5D18Q8NGL1 313 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 OR4C13Q8NGP0 309 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 RPS4Y2Q8TD47 263 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 SPACA5Q96QH8 159 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 PPA2Q9H2U2 334 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 UBE2J1Q9Y385 318 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-213ENST00000496347 SESN1Q9Y6P5 492 aa12.76□□□□□ -0.37
HDAC4-213ENST00000496347 FUOMA2VDF0 154 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 M0QZ24 198 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 OR2H2O95918 312 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 ARG1P05089 322 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 CD2P06729 351 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 DUSP1P28562 367 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 GABRA5P31644 462 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 IL18R1Q13478 541 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 CDK5R1Q15078 307 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 KISS1Q15726 138 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 SMN1Q16637 294 aaKnown RBP12.75□□□□□ -0.37
HDAC4-213ENST00000496347 TTC23Q5W5X9 447 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 ZNF529Q6P280 563 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 RPL22L1Q6P5R6 122 aaKnown RBP12.75□□□□□ -0.37
HDAC4-213ENST00000496347 TMPRSS11AQ6ZMR5 421 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 OR4S1Q8NGB4 309 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 OR52N4Q8NGI2 321 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 CDCA4Q9BXL8 241 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 GAL3ST2Q9H3Q3 398 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 DIMT1Q9UNQ2 313 aaKnown RBP12.75□□□□□ -0.37
HDAC4-213ENST00000496347 GSTK1Q9Y2Q3 226 aa12.75□□□□□ -0.37
HDAC4-213ENST00000496347 CMYA5Q8N3K9 4069 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 SIRPB1O00241 398 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 RAB3AP20336 220 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 LMO1P25800 156 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 MTNR1BP49286 362 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 SNU13P55769 128 aaKnown RBP12.74□□□□□ -0.37
HDAC4-213ENST00000496347 SRSF4Q08170 494 aaKnown RBP12.74□□□□□ -0.37
HDAC4-213ENST00000496347 RCN1Q15293 331 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 MINOS1Q5TGZ0 78 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 CRIP3Q6Q6R5 217 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 TRAPPC6BQ86SZ2 158 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 DTX3Q8N9I9 347 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 CNIH3Q8TBE1 160 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 GPR148Q8TDV2 347 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 CYGBQ8WWM9 190 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 RGP1Q92546 391 aaPredicted RBP12.74□□□□□ -0.37
HDAC4-213ENST00000496347 SMIM19Q96E16 107 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 MALSU1Q96EH3 234 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 NPFFR1Q9GZQ6 430 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 FBLN5Q9UBX5 448 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 EXOSC1Q9Y3B2 195 aaKnown RBP12.74□□□□□ -0.37
HDAC4-213ENST00000496347 MINOS1-NBL1R4GNA1 71 aa12.74□□□□□ -0.37
HDAC4-213ENST00000496347 TET2Q6N021 2002 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-213ENST00000496347 TRGV10A0A0A0MS01 117 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 IGHV2-26A0A0B4J1V2 119 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 MAGEB3O15480 346 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 TMEM225BP0DP42 221 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 ZNF44P15621 663 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 ETV1P50549 477 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 DYNLT3P51808 116 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 MED21Q13503 144 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 LRRC36Q1X8D7 754 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 ELP2Q6IA86 826 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 ASPHD2Q6ICH7 369 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 LHFPL4Q7Z7J7 247 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 TPRX1Q8N7U7 411 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 PXT1Q8NFP0 134 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 CLEC7AQ9BXN2 247 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 TMEM133Q9H2Q1 129 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 TCF7L1Q9HCS4 588 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 HSPE1-MOB4S4R3N1 261 aa12.73□□□□□ -0.37
HDAC4-213ENST00000496347 MEX3AA1L020 520 aaKnown RBP12.72□□□□□ -0.37
HDAC4-213ENST00000496347 CHST1O43916 411 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 CLIC3O95833 236 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 CALCBP10092 127 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 GTF2A1P52655 376 aaPredicted RBP12.72□□□□□ -0.37
HDAC4-213ENST00000496347 PPP3R1P63098 170 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 LY6EQ16553 131 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 XAF1Q6GPH4 301 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 OR52N1Q8NH53 320 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 TMEM106AQ96A25 262 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 MMP27Q9H306 513 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 ABCB10Q9NRK6 738 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 TAS2R3Q9NYW6 316 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.72□□□□□ -0.37
HDAC4-213ENST00000496347 PITPNC1Q9UKF7 332 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 TCF19Q9Y242 345 aa12.72□□□□□ -0.37
HDAC4-213ENST00000496347 ODAMA1E959 279 aa12.71□□□□□ -0.37
HDAC4-213ENST00000496347 SLC33A1O00400 549 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-213ENST00000496347 GABRPO00591 440 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms