RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	NBAS	A2RRP1	2371 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	COL6A6	A6NMZ7	2263 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	OR2AT4	A6NND4	320 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ABCD4	O14678	606 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ADORA2A-AS1	P86434	159 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	CHRFAM7A	Q494W8	412 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	CD276	Q5ZPR3	534 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081		Q6ZPA2	131 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ZNF826P	Q6ZT77	177 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	OVCH2	Q7RTZ1	564 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	OR2Z1	Q8NG97	314 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	MRPL37	Q9BZE1	423 aa	Known RBP	13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ALX4	Q9H161	411 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	C12orf4	Q9NQ89	552 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ANXA10	Q9UJ72	324 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ZSCAN5B	A6NJL1	495 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	FAM90A27P	A6NNH2	459 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	NOS1AP	O75052	506 aa	Predicted RBP	13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	BSPH1	Q075Z2	132 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	FBXL19-AS1	Q494R0	122 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	POC1A	Q8NBT0	407 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	OR11H7	Q8NGC8	314 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	TERB2	Q8NHR7	220 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	IFT22	Q9H7X7	185 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	SPACA1	Q9HBV2	294 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	GPN1	Q9HCN4	374 aa	Predicted RBP	13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	VSIG4	Q9Y279	399 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	PLCE1	Q9P212	2302 aa		13.87	□□□□□ -0.19
HLA-A-208	ENST00000496081	TRAV24	A0A0B4J272	114 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	SNRPGP15	A8MWD9	76 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081		H3BUI4	141 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	SDCBP	O00560	298 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	SSNA1	O43805	119 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	NXPH2	O95156	264 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	GMFB	P60983	142 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	TSPAN5	P62079	268 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	ZNF626	Q68DY1	528 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081		Q6P435	159 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	SLC22A25	Q6T423	547 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	WDR82	Q6UXN9	313 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	TMED4	Q7Z7H5	227 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	SUMF2	Q8NBJ7	301 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	OR52B4	Q8NGK2	314 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	CAPSL	Q8WWF8	208 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	DMRTB1	Q96MA1	342 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	BBC3	Q96PG8	261 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	PPA2	Q9H2U2	334 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	HES4	Q9HCC6	221 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	CA10	Q9NS85	328 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	UFSP2	Q9NUQ7	469 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	EHF	Q9NZC4	300 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	COQ3	Q9NZJ6	369 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	PLSCR5	A0PG75	271 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	NKX2-6	A6NCS4	301 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081		A6NLC8	198 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	MCRIP1	C9JLW8	97 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	HSPB6	O14558	160 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	HS3ST1	O14792	307 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	CXCL3	P19876	107 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	CD200	P41217	278 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	ARPC4	P59998	168 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	MZT1	Q08AG7	82 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	CDK10	Q15131	360 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	ZDHHC22	Q8N966	263 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	LILRB4	Q8NHJ6	448 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	FN3KRP	Q9HA64	309 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	ING3	Q9NXR8	418 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	TAAR3P	Q9P1P4	343 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	ZNF69	Q9UC07	566 aa		13.86	□□□□□ -0.19
HLA-A-208	ENST00000496081	DEGS1	O15121	323 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	CREBL2	O60519	120 aa	Predicted RBP	13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	PTBP3	O95758	552 aa	Known RBP	13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	NAPSA	O96009	420 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	SULT1A3	P0DMM9	295 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	SULT1A4	P0DMN0	295 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	ZNF44	P15621	663 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	SELENOV	P59797	346 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	ZNF146	Q15072	292 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	CDSN	Q15517	529 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	C17orf107	Q6ZR85	190 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	LHFPL1	Q86WI0	220 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	TMEM17	Q86X19	198 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	TCTE3	Q8IZS6	198 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	MARCH1	Q8TCQ1	289 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	CCDC107	Q8WV48	283 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	RDH5	Q92781	318 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	RNASE6	Q93091	150 aa	Known RBP	13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	MRPL24	Q96A35	216 aa	Known RBP	13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	ELMOD3	Q96FG2	381 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	NGB	Q9NPG2	151 aa		13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	RALY	Q9UKM9	306 aa	Known RBP	13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	CHD3	Q12873	2000 aa	Known RBP	13.85	□□□□□ -0.19
HLA-A-208	ENST00000496081	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.84	□□□□□ -0.19
HLA-A-208	ENST00000496081	WNT9B	O14905	357 aa		13.84	□□□□□ -0.19
HLA-A-208	ENST00000496081	GLA	P06280	429 aa		13.84	□□□□□ -0.19
HLA-A-208	ENST00000496081	OR4E1	P0C645	316 aa		13.84	□□□□□ -0.19
HLA-A-208	ENST00000496081	HOXA4	Q00056	320 aa	Predicted RBP	13.84	□□□□□ -0.19
HLA-A-208	ENST00000496081	SNTB1	Q13884	538 aa	Known RBP	13.84	□□□□□ -0.19
HLA-A-208	ENST00000496081	GRK1	Q15835	563 aa		13.84	□□□□□ -0.19

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