RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 IGHV1-46P01743 117 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 IGHV3-13P01766 116 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 MT-ND2P03891 347 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 OR2T7P0C7T2 308 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 PSKH1P11801 424 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 ZNF19P17023 458 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 ZNF32P17041 273 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 ALOX5APP20292 161 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 DCKP27707 260 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 PSMB10P40306 273 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 MAP2K4P45985 399 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 LSM6P62312 80 aaKnown RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 SLC35A2P78381 396 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 PSG4Q00888 419 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 ZNF85Q03923 595 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 BAMBIQ13145 260 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 UBE2V1Q13404 147 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 ENDOGQ14249 297 aaKnown RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 TAF13Q15543 124 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 SPRNQ5BIV9 151 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 TMEM255AQ5JRV8 349 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 KLF17Q5JT82 389 aaPredicted RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 TEX30Q5JUR7 227 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 MZT2BQ6NZ67 158 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 DCXRQ7Z4W1 244 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 KRT77Q7Z794 578 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 DEFB108BQ8NET1 73 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 TSPAN14Q8NG11 270 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 OR2T27Q8NH04 317 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 AKR7LQ8NHP1 331 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 OTOSQ8NHW6 89 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 PHF21AQ96BD5 680 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 TIMD4Q96H15 378 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 AMELYQ99218 206 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 GAL3ST1Q99999 423 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 ABHD6Q9BV23 337 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 BCL2L14Q9BZR8 327 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 HRH4Q9H3N8 390 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 CCNB1IP1Q9NPC3 277 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 FKBP14Q9NWM8 211 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 CNOT2Q9NZN8 540 aaKnown RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 CYB5R1Q9UHQ9 305 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 BLOC1S6Q9UL45 172 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 DIMT1Q9UNQ2 313 aaKnown RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 COPS3Q9UNS2 423 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 POLR1DQ9Y2S0 133 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 KLHDC2Q9Y2U9 406 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 TIMM10BQ9Y5J6 103 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 N6AMT1Q9Y5N5 214 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 SNX5Q9Y5X3 404 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 SOX21Q9Y651 276 aaPredicted RBP5.3□□□□□ -1.56
VIM-207ENST00000495528 LHFPL6Q9Y693 200 aa5.3□□□□□ -1.56
VIM-207ENST00000495528 PPIAL4EA0A075B759 164 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 A0A087WXM4 84 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PPIAL4CA0A0B4J2A2 164 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 hCG_1807616A0A1W2PRN6 198 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 ISPDA4D126 451 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PRSS47A8MTI9 375 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PPIAL4DF5H284 164 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 DVL1O14640 695 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 RPP14O95059 124 aaKnown RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 HTR1AP08908 422 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 MMP7P09237 267 aaPredicted RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 H2BFMP0C1H6 154 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 LIMS3P0CW19 117 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 LIMS4P0CW20 117 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PPIAL4FP0DN26 164 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PIPP12273 146 aaPredicted RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 ATP6V1B1P15313 513 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 MYL12AP19105 171 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 CCNOP22674 350 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 MPV17P39210 176 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 MMP15P51511 669 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 OR12D2P58182 307 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PCBD1P61457 104 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 HIST1H3AP68431 136 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 EMX1Q04741 257 aaPredicted RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 ZNF154Q13106 437 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 MOGQ16653 247 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PCK2Q16822 640 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 TBC1D28Q2M2D7 210 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 SLC36A2Q495M3 483 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 TP53I3Q53FA7 332 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 CCDC92Q53HC0 331 aaPredicted RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 PABPC1L2AQ5JQF8 200 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 SPATA46Q5T0L3 261 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 HIST2H3PS2Q5TEC6 136 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 OR2G6Q5TZ20 316 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 ZNF774Q6NX45 483 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 TMEM53Q6P2H8 277 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 ZNF322Q6U7Q0 402 aaPredicted RBP5.29□□□□□ -1.56
VIM-207ENST00000495528 LRRN1Q6UXK5 716 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PLEKHG7Q6ZR37 379 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 HIST2H3AQ71DI3 136 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 SSX6Q7RTT6 188 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 PRSS48Q7RTY5 328 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 NAA40Q86UY6 237 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 GBGT1Q8N5D6 347 aa5.29□□□□□ -1.56
VIM-207ENST00000495528 YIPF7Q8N8F6 280 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms