RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 OR51E2Q9H255 320 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 C19orf12Q9NSK7 152 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 ZNF581Q9P0T4 197 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 GLS2Q9UI32 602 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 SHISA3A0PJX4 238 aa16.03■□□□□ 0.16
HDAC4-212ENST00000495497 CSTBP04080 98 aaKnown RBP16.03■□□□□ 0.16
HDAC4-212ENST00000495497 ZNF44P15621 663 aa16.03■□□□□ 0.16
HDAC4-212ENST00000495497 FAM185AQ8N0U4 392 aa16.03■□□□□ 0.16
HDAC4-212ENST00000495497 OSR2Q8N2R0 312 aa16.03■□□□□ 0.16
HDAC4-212ENST00000495497 OR51T1Q8NGJ9 327 aa16.03■□□□□ 0.16
HDAC4-212ENST00000495497 C1orf147Q96MC9 270 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-212ENST00000495497 SEBOXQ9HB31 216 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-212ENST00000495497 IL36GQ9NZH8 169 aa16.03■□□□□ 0.16
HDAC4-212ENST00000495497 ONECUT1Q9UBC0 465 aa16.03■□□□□ 0.16
HDAC4-212ENST00000495497 CUBNO60494 3623 aa16.03■□□□□ 0.16
HDAC4-212ENST00000495497 IGHV3OR16-10A0A075B7F0 116 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 A0A1W2PQ09 198 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 MEX3AA1L020 520 aaKnown RBP16.02■□□□□ 0.16
HDAC4-212ENST00000495497 DEGS1O15121 323 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 SRD5A1P18405 259 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 OR3A1P47881 315 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 BMXP51813 675 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 GRK1Q15835 563 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 C11orf91Q3C1V1 193 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 TPRX1Q8N7U7 411 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 C8orf46Q8TAG6 207 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 FOXRED1Q96CU9 486 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-212ENST00000495497 UQCC2Q9BRT2 126 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 PCGF1Q9BSM1 259 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 FAM234AQ9H0X4 552 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 KCNK15Q9H427 330 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 BANF2Q9H503 90 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 TXNL4BQ9NX01 149 aaKnown RBP16.02■□□□□ 0.16
HDAC4-212ENST00000495497 STUB1Q9UNE7 303 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 ST3GAL6Q9Y274 331 aa16.02■□□□□ 0.16
HDAC4-212ENST00000495497 A0A0G2JK05 382 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 TRIM64CA6NLI5 447 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 SLC33A1O00400 549 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-212ENST00000495497 LIPFP07098 398 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 CD37P11049 281 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 MMP9P14780 707 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 CD36P16671 472 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 PRB3Q04118 309 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-212ENST00000495497 EDDM3AQ14507 147 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 KLF17Q5JT82 389 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-212ENST00000495497 C1orf100Q5SVJ3 147 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 OR8H2Q8N162 312 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 TBC1D15Q8TC07 691 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 TBX15Q96SF7 602 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 SIRPDQ9H106 197 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 PPA2Q9H2U2 334 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 DOCK11Q5JSL3 2073 aa16.01■□□□□ 0.15
HDAC4-212ENST00000495497 WNK2Q9Y3S1 2297 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 HSPB6O14558 160 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 GEMIN2O14893 280 aaKnown RBP16■□□□□ 0.15
HDAC4-212ENST00000495497 ZNF780AO75290 641 aaPredicted RBP16■□□□□ 0.15
HDAC4-212ENST00000495497 TOX4O94842 621 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 FSHBP01225 129 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 SMIM18P0DKX4 95 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 GADD45AP24522 165 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 LMO1P25800 156 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 HTR2CP28335 458 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 DLX1P56177 255 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 EDDM3BP56851 147 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 RBM11P57052 281 aaKnown RBP16■□□□□ 0.15
HDAC4-212ENST00000495497 RPL31P62899 125 aaKnown RBP16■□□□□ 0.15
HDAC4-212ENST00000495497 IL13RA2Q14627 380 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 P2RY14Q15391 338 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 TMEM200BQ69YZ2 307 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 OR10K2Q6IF99 312 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 GDPD3Q7L5L3 318 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 TMEM104Q8NE00 496 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 NANPQ8TBE9 248 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 FAM46BQ96A09 425 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 WDFY2Q96P53 400 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 CHCHD6Q9BRQ6 235 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 RNF167Q9H6Y7 350 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 VCX3AQ9NNX9 186 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 ING3Q9NXR8 418 aa16■□□□□ 0.15
HDAC4-212ENST00000495497 NIPBLQ6KC79 2804 aaeCLIP16■□□□□ 0.15
HDAC4-212ENST00000495497 TRBV23-1A0A0A0MS06 115 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 TRAV1-2A0A0B4J238 106 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 TRAV24A0A0B4J272 114 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 SLC22A1O15245 554 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 CRTAPO75718 401 aaPredicted RBP15.99■□□□□ 0.15
HDAC4-212ENST00000495497 FAM157CP0CG43 387 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 IGHV4-38-2P0DP08 117 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 GTF2F2P13984 249 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 GALP22466 123 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 OR10A3P58181 314 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 ZNF273Q14593 569 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 TAF9Q16594 264 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 METTL11BQ5VVY1 283 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 BPIFB2Q8N4F0 458 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 Q8N7P7 452 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 OR5D13Q8NGL4 314 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 SLC25A28Q96A46 364 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 UPRTQ96BW1 309 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 SELENOIQ9C0D9 397 aa15.99■□□□□ 0.15
HDAC4-212ENST00000495497 PLGRKTQ9HBL7 147 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms