RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	AJUBA	Q96IF1	538 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	ZNF714	Q96N38	554 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	SLITRK2	Q9H156	845 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	BEX1	Q9HBH7	125 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	EXOSC4	Q9NPD3	245 aa	Known RBP	10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	BABAM2	Q9NXR7	383 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	CNOT2	Q9NZN8	540 aa	Known RBP	10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	PCDHGB5	Q9Y5G0	923 aa		10.86	□□□□□ -0.67
RBM28-208	ENST00000495327	hADV38S2	A0JD32	116 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	EFCAB10	A6NFE3	127 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	ANKRD65	E5RJM6	399 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	SH2D1B	O14796	132 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	LALBA	P00709	142 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	CSN2	P05814	226 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	OMG	P23515	440 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	LMO1	P25800	156 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	DUSP1	P28562	367 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	BMX	P51813	675 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	SNU13	P55769	128 aa	Known RBP	10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	EDDM3A	Q14507	147 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	AANAT	Q16613	207 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	LAIR2	Q6ISS4	152 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	PXT1	Q8NFP0	134 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	OR4S1	Q8NGB4	309 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	GGH	Q92820	318 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	TMEM106A	Q96A25	262 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	CHST6	Q9GZX3	395 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	MEGF9	Q9H1U4	602 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	PLCXD1	Q9NUJ7	323 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	CHCHD3	Q9NX63	227 aa	Known RBP	10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	CLEC2D	Q9UHP7	191 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	GSTK1	Q9Y2Q3	226 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	ZNF281	Q9Y2X9	895 aa		10.85	□□□□□ -0.67
RBM28-208	ENST00000495327	ODF3B	A8MYP8	253 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	SIRPB1	O00241	398 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	GABRP	O00591	440 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	OR2H2	O95918	312 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	IGHV1-8	P0DP01	117 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	SOX2	P48431	317 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	MTNR1B	P49286	362 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	P2RX3	P56373	397 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	ST3GAL4	Q11206	333 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	LRRC75B	Q2VPJ9	315 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	OLFML2A	Q68BL7	652 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	ZNF626	Q68DY1	528 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	DMKN	Q6E0U4	476 aa	Predicted RBP	10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	ELP2	Q6IA86	826 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	CHST4	Q8NCG5	386 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	OR51A2	Q8NGJ7	313 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	OR13D1	Q8NGV5	346 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	WFDC12	Q8WWY7	111 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	TAS2R4	Q9NYW5	299 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	TBL2	Q9Y4P3	447 aa	Known RBP	10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	KIAA2026	Q5HYC2	2103 aa		10.84	□□□□□ -0.67
RBM28-208	ENST00000495327	TRBV5-5	A0A0J9YX44	114 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	CLPSL1	A2RUU4	121 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	FUOM	A2VDF0	154 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	FAM90A8P	A6NJQ4	464 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	MAGEB3	O15480	346 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	CLPX	O76031	633 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	ALDOB	P05062	364 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	TMEM225B	P0DP42	221 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	CALCB	P10092	127 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	COX7A1	P24310	79 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	TAS2R43	P59537	309 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	YIF1B	Q5BJH7	314 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.83	□□□□□ -0.68
RBM28-208	ENST00000495327		Q6P435	159 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	TPRX1	Q8N7U7	411 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327		Q8NFD4	153 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	OR11H6	Q8NGC7	330 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	C17orf50	Q8WW18	174 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	TFAP2C	Q92754	450 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	PGLYRP3	Q96LB9	341 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	FKBP14	Q9NWM8	211 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	PSORS1C1	Q9UIG5	152 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327	MGAM2	Q2M2H8	2515 aa		10.83	□□□□□ -0.68
RBM28-208	ENST00000495327		H0YJX3	145 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327		H3BUX3	64 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	SLC33A1	O00400	549 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	MYL12B	O14950	172 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	XPNPEP2	O43895	674 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	ZNF44	P15621	663 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	FST	P19883	344 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	TGFBR2	P37173	567 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	LGALS4	P56470	323 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	PPP3R1	P63098	170 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	SLC34A1	Q06495	639 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	GABPB1	Q06547	395 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	IL13RA2	Q14627	380 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327		Q499Y3	187 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	PRR31	Q5SQ13	230 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	ASCL4	Q6XD76	172 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327		Q6ZSV7	163 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	AHSA2	Q719I0	299 aa		10.82	□□□□□ -0.68
RBM28-208	ENST00000495327	OR51T1	Q8NGJ9	327 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms