RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	TEX38	Q6PEX7	206 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	DND1	Q8IYX4	353 aa	Known RBP	10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	CDRT4	Q8N9R6	151 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	OR52L2P	Q8NGH6	319 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	OR1J1	Q8NGS3	322 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	SFXN5	Q8TD22	340 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	DIO2	Q92813	273 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	MOAP1	Q96BY2	351 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	SNRNP40	Q96DI7	357 aa	Known RBP	10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	SLC35G5	Q96KT7	338 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	SIGMAR1	Q99720	223 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	ALG12	Q9BV10	488 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	OR5AC2	Q9NZP5	309 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	NTM	Q9P121	344 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	NTNG1	Q9Y2I2	539 aa		10.12	□□□□□ -0.79
BRCA1-222	ENST00000493919	C7orf77	A4D0Y5	90 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	DHRS7C	A6NNS2	312 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919		M0QXV9	152 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	LANCL1	O43813	399 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	CD14	P08571	375 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ACP2	P11117	423 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	OR10J1	P30954	320 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	KDELR2	P33947	212 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ZFP36L2	P47974	494 aa	Known RBP	10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	DNASE1L1	P49184	302 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	VAMP3	Q15836	100 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	DUSP5	Q16690	384 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919		Q6ZPB1	254 aa	Predicted RBP	10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ZNF621	Q6ZSS3	439 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ZNF605	Q86T29	641 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	WFDC8	Q8IUA0	241 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	COX18	Q8N8Q8	333 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	SLC16A11	Q8NCK7	471 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	OR5D16	Q8NGK9	328 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	MOB3A	Q96BX8	217 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	CCDC115	Q96NT0	180 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ADO	Q96SZ5	270 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	RSG1	Q9BU20	258 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	LMF2	Q9BU23	707 aa	Known RBP	10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	SLC17A5	Q9NRA2	495 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	DEPP	Q9NTK1	212 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	RPS6KB2	Q9UBS0	482 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	PSORS1C1	Q9UIG5	152 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	VAX2	Q9UIW0	290 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	CBLC	Q9ULV8	474 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	GXYLT2	A0PJZ3	443 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	IGSF23	A1L1A6	192 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ZNF814	B7Z6K7	855 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	PYCARD-AS1	I3L0S3	204 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	SYNGR4	O95473	234 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ACTL6A	O96019	429 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	PET100	P0DJ07	73 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	F2R	P25116	425 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	MTNR1B	P49286	362 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ELOA3B	Q3SY89	546 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	FAM24B	Q8N5W8	94 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	SLC30A7	Q8NEW0	376 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ELOA3	Q8NG57	546 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	TMEM239	Q8WW34	195 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	DUX5	Q96PT3	197 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	DOHH	Q9BU89	302 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	TAPBPL	Q9BX59	468 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	TMEM100	Q9NV29	134 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	GPATCH2	Q9NW75	528 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	KLRF1	Q9NZS2	232 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	NBAS	A2RRP1	2371 aa		10.11	□□□□□ -0.79
BRCA1-222	ENST00000493919	ARPC1B	O15143	372 aa	Known RBP	10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	FARS2	O95363	451 aa	Known RBP	10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	DUSP1	P28562	367 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	CDK5	Q00535	292 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	PLGLB1	Q02325	96 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	BCORP1	Q8N888	145 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	OR5B12	Q96R08	314 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	GABARAPL1	Q9H0R8	117 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	RAB18	Q9NP72	206 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	B3GAT2	Q9NPZ5	323 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	SERHL	Q9NQF3	203 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	CGGBP1	Q9UFW8	167 aa	Predicted RBP	10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	C14orf166	Q9Y224	244 aa	Known RBP	10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	EML6	Q6ZMW3	1958 aa		10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.1	□□□□□ -0.79
BRCA1-222	ENST00000493919	PINLYP	A6NC86	204 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	SLC17A3	O00476	420 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	NME4	O00746	187 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	TNFSF13	O75888	250 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	NKX2-2	O95096	273 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	SFTA3	P0C7M3	94 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	BTC	P35070	178 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	MFAP4	P55083	255 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	PIGP	P57054	158 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	PSMA6	P60900	246 aa	Known RBP	10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	ZNF345	Q14585	488 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	C22orf42	Q6IC83	251 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	CNIH2	Q6PI25	160 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	DHRS11	Q6UWP2	260 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	ASCL4	Q6XD76	172 aa		10.09	□□□□□ -0.79
BRCA1-222	ENST00000493919	H1FNT	Q75WM6	255 aa	Predicted RBP	10.09	□□□□□ -0.79

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