RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 JUNBP17275 347 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-208ENST00000493601 SNU13P55769 128 aaKnown RBP13.35□□□□□ -0.27
PTPRU-208ENST00000493601 PDZK1IP1Q13113 114 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 OR52W1Q6IF63 320 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 FDX2Q6P4F2 183 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 C16orf82Q7Z2V1 217 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 OR4P4Q8NGL7 312 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 AKR1E2Q96JD6 320 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 OR5M11Q96RB7 305 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 MBOAT4Q96T53 435 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 HMG20AQ9NP66 347 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 EXOSC4Q9NPD3 245 aaKnown RBP13.35□□□□□ -0.27
PTPRU-208ENST00000493601 FRRS1LQ9P0K9 344 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 ORC6Q9Y5N6 252 aa13.35□□□□□ -0.27
PTPRU-208ENST00000493601 DAPL1A0PJW8 107 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 SAC3D1A6NKF1 404 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 ADARB2-AS1A8MUL3 147 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 FAM90A22PA8MWA6 464 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 SIRPB1O00241 398 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 SLC16A6O15403 523 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 PIN1P1O15428 100 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 CIB2O75838 187 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 OR2H2O95918 312 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 BLCAPP62952 87 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 PRAMEF5Q5TYX0 476 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 HEPN1Q6WQI6 88 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 RTN4RL2Q86UN3 420 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 OR13C3Q8NGS6 347 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 ZNF596Q8TC21 504 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 CAPSLQ8WWF8 208 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 RNFT2Q96EX2 444 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 RHOFQ9HBH0 211 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 HHLA2Q9UM44 414 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 GSTK1Q9Y2Q3 226 aa13.34□□□□□ -0.27
PTPRU-208ENST00000493601 PRB2P02812 416 aaPredicted RBP13.33□□□□□ -0.28
PTPRU-208ENST00000493601 HTR1AP08908 422 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 CALCBP10092 127 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 BRS3P32247 399 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 CCR9P51686 369 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 NANOS3P60323 173 aaKnown RBP13.33□□□□□ -0.28
PTPRU-208ENST00000493601 BDH1Q02338 343 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 TMEM95Q3KNT9 176 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 OXLD1Q5BKU9 147 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 SLC25A30Q5SVS4 291 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 MEDAGQ5VYS4 303 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 Q6ZPA2 131 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 Q6ZS46 218 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 ABHD12Q8N2K0 398 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 RFT1Q96AA3 541 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 MRPL48Q96GC5 212 aaKnown RBP13.33□□□□□ -0.28
PTPRU-208ENST00000493601 LIN7BQ9HAP6 207 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 NEK6Q9HC98 313 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 NECAP2Q9NVZ3 263 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 FAM53CQ9NYF3 392 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 TAS2R3Q9NYW6 316 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.33□□□□□ -0.28
PTPRU-208ENST00000493601 DPM3Q9P2X0 92 aa13.33□□□□□ -0.28
PTPRU-208ENST00000493601 NOTCH3Q9UM47 2321 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 SNTNA6NMZ2 147 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 J3QRE1 110 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 MMP23AO75900 390 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 KDM4BO94953 1096 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 MT-ND2P03891 347 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 ALPLP05186 524 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 CDK2P24941 298 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 CEACAM3P40198 252 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 SAXO1Q8IYX7 474 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 ACBD7Q8N6N7 88 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 CHST4Q8NCG5 386 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 SGCDQ92629 289 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 CORO2AQ92828 525 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 CREB3L1Q96BA8 519 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 HRASLS5Q96KN8 279 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 MYCBPQ99417 103 aaPredicted RBP13.32□□□□□ -0.28
PTPRU-208ENST00000493601 COMMD4Q9H0A8 199 aa13.32□□□□□ -0.28
PTPRU-208ENST00000493601 IGKV1-12A0A0C4DH73 117 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 LEUTXA8MZ59 168 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 IGKV1D-12P01611 117 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 CSN2P05814 226 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 ZNF44P15621 663 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 LMO1P25800 156 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 CD34P28906 385 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 PTGFRP43088 359 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 SNRPGP62308 76 aaKnown RBP13.31□□□□□ -0.28
PTPRU-208ENST00000493601 KPNB1Q14974 876 aaKnown RBP13.31□□□□□ -0.28
PTPRU-208ENST00000493601 OR5AU1Q8NGC0 362 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 OR4D6Q8NGJ1 314 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 OR51A4Q8NGJ6 313 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 OR5D18Q8NGL1 313 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 OR13C9Q8NGT0 318 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 SPACA5Q96QH8 159 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 OCSTAMPQ9BR26 566 aa13.31□□□□□ -0.28
PTPRU-208ENST00000493601 KIAA2026Q5HYC2 2103 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 A0A1W2PRX2 142 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 ODAMA1E959 279 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 FAM172BPA6NC97 362 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 OR4C45A6NMZ5 311 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 J3QLW9 94 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 IGLV1-47P01700 117 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 RPSAP08865 295 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms