RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 GCM1Q9NP62 436 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 RASL12Q9NYN1 266 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 UBE2QL1A1L167 161 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 DEGS1O15121 323 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 AKAIN1P0CW23 69 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 ZNF44P15621 663 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 BTCP35070 178 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 SNRPD2P62316 118 aaKnown RBP18.25■□□□□ 0.51
SMC4-221ENST00000489573 CCL8P80075 99 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 MEX3BQ6ZN04 569 aaKnown RBP18.25■□□□□ 0.51
SMC4-221ENST00000489573 Q8TCH9 128 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 FBXW5Q969U6 566 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 EGLN1Q9GZT9 426 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 GLS2Q9UI32 602 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 KLF2Q9Y5W3 355 aaPredicted RBP18.25■□□□□ 0.51
SMC4-221ENST00000489573 MCRIP1C9JLW8 97 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 SH2D1BO14796 132 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 KNG1P01042 644 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 CD3DP04234 171 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 EGR1P18146 543 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 SLC6A1P30531 599 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 STEAP1BQ6NZ63 245 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 ZCCHC24Q8N2G6 241 aaKnown RBP18.24■□□□□ 0.51
SMC4-221ENST00000489573 GCSAMQ8N6F7 178 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 SUMF2Q8NBJ7 301 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 OR4C16Q8NGL9 310 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 OR11L1Q8NGX0 322 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 DYRK2Q92630 601 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 HDHD3Q9BSH5 251 aaPredicted RBP18.24■□□□□ 0.51
SMC4-221ENST00000489573 SAP30LQ9HAJ7 183 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 DECR2Q9NUI1 292 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 RNF7Q9UBF6 113 aa18.24■□□□□ 0.51
SMC4-221ENST00000489573 TRAV24A0A0B4J272 114 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 ZNF736B4DX44 427 aaPredicted RBP18.23■□□□□ 0.51
SMC4-221ENST00000489573 OR2H2O95918 312 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 HAND1O96004 215 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 GLAP06280 429 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 NAT1P18440 290 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 HLA-DMAP28067 261 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 HOXA4Q00056 320 aaPredicted RBP18.23■□□□□ 0.51
SMC4-221ENST00000489573 HOGA1Q86XE5 327 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 FAM90A1Q86YD7 464 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 OR4S1Q8NGB4 309 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 ZNF701Q9NV72 531 aaPredicted RBP18.23■□□□□ 0.51
SMC4-221ENST00000489573 OR14J1Q9UGF5 321 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 PPP1R3CQ9UQK1 317 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 NPTNQ9Y639 398 aa18.23■□□□□ 0.51
SMC4-221ENST00000489573 HS3ST1O14792 307 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 LHBP01229 141 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 CD74P04233 296 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 DTYMKP23919 212 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 OR52W1Q6IF63 320 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 FAAP20Q6NZ36 180 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 DUSP18Q8NEJ0 188 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 NEK7Q8TDX7 302 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 DPCDQ9BVM2 203 aaPredicted RBP18.22■□□□□ 0.51
SMC4-221ENST00000489573 CHST6Q9GZX3 395 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 DPAGT1Q9H3H5 408 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 C12orf4Q9NQ89 552 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 FAIMQ9NVQ4 179 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 MCUBQ9NWR8 336 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 NLKQ9UBE8 527 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 ADGRG4Q8IZF6 3080 aa18.22■□□□□ 0.51
SMC4-221ENST00000489573 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 SIRPB1O00241 398 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 HSPB6O14558 160 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 RAB3DO95716 219 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 RBM39Q14498 530 aaKnown RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 PLA1AQ53H76 456 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 GLCCI1Q86VQ1 547 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 BOLLQ8N9W6 283 aaKnown RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 RDH5Q92781 318 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 HPS1Q92902 700 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 SNAPC3Q92966 411 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 ST6GALNAC5Q9BVH7 336 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 ZNF230Q9UIE0 474 aaPredicted RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 SPTBN1Q01082 2364 aaKnown RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 CHD3Q12873 2000 aaKnown RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 A6NNC1 897 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 SLC33A1O00400 549 aaPredicted RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 GOSR1O95249 250 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 FCGR3AP08637 254 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 IRF2P14316 349 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 AMY2BP19961 511 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 TBPP20226 339 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 GIFP27352 417 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 RBMXP38159 391 aaKnown RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 PAN3Q58A45 887 aaKnown RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 PLET1Q6UQ28 207 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 OR4D10Q8NGI6 311 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 MMP28Q9H239 520 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 CBLN4Q9NTU7 201 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 DNAJB11Q9UBS4 358 aa18.21■□□□□ 0.51
SMC4-221ENST00000489573 FBXO9Q9UK97 447 aaPredicted RBP18.21■□□□□ 0.51
SMC4-221ENST00000489573 M0QYG6 137 aa18.2■□□□□ 0.5
SMC4-221ENST00000489573 CEBPDP49716 269 aaPredicted RBP18.2■□□□□ 0.5
SMC4-221ENST00000489573 PPOXP50336 477 aa18.2■□□□□ 0.5
SMC4-221ENST00000489573 MEF2DQ14814 521 aa18.2■□□□□ 0.5
SMC4-221ENST00000489573 ACTBL2Q562R1 376 aa18.2■□□□□ 0.5
SMC4-221ENST00000489573 RNASE10Q5GAN6 216 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms