RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FKBP14Q9NWM8 211 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 POMT1Q9Y6A1 747 aa11.71□□□□□ -0.53
BRCA1-218ENST00000489037 IGKV1-12A0A0C4DH73 117 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 A0A0U1RQK1 487 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 PNMA8CA0A1B0GUJ8 204 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 MEIOCA2RUB1 952 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 BTBD17A6NE02 478 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 SIRPB1O00241 398 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 IGKV1D-12P01611 117 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 MELTFP08582 738 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 CELP19835 753 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 ZP1P60852 638 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 KLRD1Q13241 179 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 RIPK1Q13546 671 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 RSU1Q15404 277 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 DDI2Q5TDH0 399 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 RNLSQ5VYX0 342 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF529Q6P280 563 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 C3orf56Q8N813 242 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 CHST4Q8NCG5 386 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF485Q8NCK3 441 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 OR52N4Q8NGI2 321 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 TNFRSF14Q92956 283 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 C1orf147Q96MC9 270 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-218ENST00000489037 CHST6Q9GZX3 395 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 PCDHB16Q9NRJ7 776 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 IL36RNQ9UBH0 155 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 ING4Q9UNL4 249 aa11.7□□□□□ -0.54
BRCA1-218ENST00000489037 TRBV5-5A0A0J9YX44 114 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 TMEM82A0PJX8 343 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 GABRPO00591 440 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 DEGS1O15121 323 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 OR2H2O95918 312 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 CD1AP06126 327 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF728P0DKX0 622 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 HKR1P10072 659 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 CCL3L1P16619 93 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 MYF6P23409 242 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 MAPK3P27361 379 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF93P35789 620 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-218ENST00000489037 DLX1P56177 255 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 LGALS4P56470 323 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 BDH1Q02338 343 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 PRB3Q04118 309 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF273Q14593 569 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 IZUMO2Q6UXV1 221 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 C17orf107Q6ZR85 190 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 RNF144BQ7Z419 303 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 TRAPPC6BQ86SZ2 158 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 OR51A2Q8NGJ7 313 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF714Q96N38 554 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 NR1H4Q96RI1 486 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-218ENST00000489037 ANKRD60Q9BZ19 345 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 METTL9Q9H1A3 318 aa11.69□□□□□ -0.54
BRCA1-218ENST00000489037 PAK1IP1Q9NWT1 392 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-218ENST00000489037 DNHD1Q96M86 4753 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 HTR3BO95264 441 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 RBP4P02753 201 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 CSTBP04080 98 aaKnown RBP11.68□□□□□ -0.54
BRCA1-218ENST00000489037 LMO1P25800 156 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 ERP29P30040 261 aaKnown RBP11.68□□□□□ -0.54
BRCA1-218ENST00000489037 SAA4P35542 130 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 TGFBR2P37173 567 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 PTGFRP43088 359 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 COMPP49747 757 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-218ENST00000489037 MIDNQ504T8 468 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 ELP2Q6IA86 826 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 LDLRAD3Q86YD5 345 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 OR4S1Q8NGB4 309 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 OR13D1Q8NGV5 346 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 PGLYRP3Q96LB9 341 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 CDCA4Q9BXL8 241 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 LINC00312Q9Y6C7 94 aa11.68□□□□□ -0.54
BRCA1-218ENST00000489037 TRGV10A0A0A0MS01 117 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 C17orf98A8MV24 154 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 RGS10O43665 173 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 PSPNO60542 156 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF780AO75290 641 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-218ENST00000489037 GPX5O75715 221 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 ATP6V1G2O95670 118 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 COX7A1P24310 79 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 OR3A1P47881 315 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 P2RX3P56373 397 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 SPHARQ15513 63 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 MED22Q15528 200 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF782Q6ZMW2 699 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-218ENST00000489037 PNKDQ8N490 385 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 MS4A15Q8N5U1 240 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 OR14A2Q96R54 314 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 ZNF184Q99676 751 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-218ENST00000489037 CCDC90BQ9GZT6 254 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 FOXJ3Q9UPW0 622 aa11.67□□□□□ -0.54
BRCA1-218ENST00000489037 UBE2J1Q9Y385 318 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-218ENST00000489037 A0A0G2JK05 382 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 A0A1W2PPK0 400 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 FAM181BA6NEQ2 426 aa11.66□□□□□ -0.54
BRCA1-218ENST00000489037 IGFBP3P17936 291 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-218ENST00000489037 FSTP19883 344 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms